Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1316 ATGGGTGATCCGTACCCTTATGGCCTGCTCGATTTCCAGCAACTCATATCCGCAAGAACCCACCACCATGATTTGCCGGAGCCACCGTGTGTGGGTGGTGGCACCGACGGTTCTGCAGTAGTAGCCACCACTCCACCACCAACTAATAATTACAACGTCCTTTTCTCTCATGGCTTTGCTACCACCTTTGCTCCTTCAAATCATCATCATCATCGAGACTATTCCTCAAACGTTGTCAATATTATTCCCACTTCCGCAAGCCCTACTGTTACTGCTTCATTTTCTTTAGGAAATCATGGCACTACCACTGCATTCTGTAGCAGCAGCAGTAGCATGGAGGCTGCAGAAAATGGTTGGCTTGGATTTGATGCTATGGCCAACAATAGATGGCCGAGACAAGAGACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGATTCAAAGTTCAGAGAGACCAATCACAAAGCCCCCTTATGGAATGAAATTTCTAGGATAATGAGTGAAGAATATGGGTACCAAAGAAGTGGGAAAAAATGCAAAGAGAAGTTTGAGAATCTGTATAAGTATTACAAGAAGACCAAGGAAGGGAAAGCAGGAAGACAAGATGGGAAACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCAGCAACGAACGATAATATTACTACTTCGTCTGCTAATTACCAACCTCCATTAATGACCATCACAGATGGTGAAGTTCTTCATCACAACATCAAGCACTGCTCAAAGGGCCTCATCAGTCTGTCAAACAATTCATCAGACCAGTTAGAGACATCCTCGTCTGAAAACAATAATGATGACAAAGACCTGTCGGCCATCCCCTTTATGATGAAGCAAAAACAGGTGGATCAGATAGACCAGCGAAGAGATAGTGGAAGAATGAGGGTGAGGAAGAGCCTGAGAGTTGAGGTTGAAGGGATTGTGGACTGTCACATGAGGAAGATGATAGAGAGTCAAGACGCTTGGATGGAGAAGATGATGAGTGTCGTTGAGCACAGAGAGCAAGAAATGGTGTATAAGGAACAAGAGAGGAAGAAAGATTCAATAAGATTCGATCAACAAGTGCATCAACTCTGGGCTAGAGAGAGAGCTTGGGTTGCAGAAAGAGACACTGAATTAATGGAGATCGTGAATAATCACTTGGGAAAAGAGCTTATAACAACCGATCATCGTCAACGCCATGAGACTATGGCTGAAGAATATGAAAACGAACCACAAACCAAGAGAACAAGAGCAAGAACAATGGTGGGTGCACAGAACTGGAGATCTCAAATTTGA 1311 0.4371 MGDPYPYGLLDFQQLISARTHHHDLPEPPCVGGGTDGSAVVATTPPPTNNYNVLFSHGFATTFAPSNHHHHRDYSSNVVNIIPTSASPTVTASFSLGNHGTTTAFCSSSSSMEAAENGWLGFDAMANNRWPRQETLLLLEIRSRLDSKFRETNHKAPLWNEISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEAICGESATNDNITTSSANYQPPLMTITDGEVLHHNIKHCSKGLISLSNNSSDQLETSSSENNNDDKDLSAIPFMMKQKQVDQIDQRRDSGRMRVRKSLRVEVEGIVDCHMRKMIESQDAWMEKMMSVVEHREQEMVYKEQERKKDSIRFDQQVHQLWARERAWVAERDTELMEIVNNHLGKELITTDHRQRHETMAEEYENEPQTKRTRARTMVGAQNWRSQI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1316 436 ProSiteProfiles Myb-like domain profile. 128 187 IPR001005 -
Lele43g1316 436 FunFam trihelix transcription factor PTL-like 130 192 - -
Lele43g1316 436 Gene3D - 130 192 - -
Lele43g1316 436 PANTHER FI21293P1 105 394 - -
Lele43g1316 436 Pfam Myb/SANT-like DNA-binding domain 128 215 IPR044822 -
Lele43g1316 436 CDD GT1 128 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1316 Lele-ChrLele43 21272350 21277849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1316 129 397 Trihelix Transcription Factor Family AT5G03680 44.523 4.84e-68 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele43g1316 Myb_DNA-bind_4 5.8e-20 CL0123