Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele43g1315 | ATGGGTGCGTGCTGGAGCAATCGGATCAAGGCCGTGAGTCCTTCAAGTACAGGATTTTTTTCAAGAAGTGTCAGCAGAGATGGCTGTGACACGAGCTCAAACAGCAGGAACTCATCATCCTCCATACCCATAACTCCTCGGAGTGAGGGAGAGATCTTACAATCTTCCAATTTGAAGAGCTTCAGTTACAGTGAACTTAAAACAGCCACAAGAAATTTTCGCCCCGATAGTATCTTAGGAGAGGGTGGGTTTGGTTCAGTTTTTAAGGGGTGGATTGATGAGCACTCCCTTGTTGCAACGAAGCCAGGGGCTGGCATAGTTATTGCTGTGAAGAGACTTAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGTATCATCCAAATCTTGTCAGGCTGATAGGGTACTGCTTGGAGGATGAGCATCGACTTCTAGCTTATGAATTCATGTCGAGGGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTATCAACCACTATCTTGGTCTTTGCGAATGAAAATAGCCCTTGGGGCTGCCAAGGGTCTTGCATTTCTCCATAGCACAAAACCTAAAGTCATATACCGTGACTTCAAGACTTCTAATATTCTTCTTGATACAGATTATAATGCCAAACTTTCTGACTTTGGGTTGGCCAGAGATGGACCGACTGGTGACAAGAGTCATGTCTCAACTCGAGTCATGGGTACTCACGGATATGCAGCGCCAGAATATCTTGCAACAGGACACCTCACTGCCAAGAGTGATGTATATAGTTTTGGGGTAGTTCTCCTGGAAATGTTATCAGGAAGACGAGCCATAGACAAAAACCGGCCATCCGGAGAACATAACCTTGTAGAGTGGGCAAAACCTTATCTATCAAATAAACGAAGGTCTTTTCGTGTTATCGATGGCCGTCTTGAAGGTCAGTACCCTCTGAGTCGAGCTCAAAGGGCAGCAGCCCTTGCTTACCAGTGTCTTTCTGCAGAACCTAAGTTCAGACCAAACATGGAAGAGGTAGTAAGAGCATTGGAGCAACTTCAGGAATCAAAGGACATGGCAAAAAGTTCTGATAAGAAAGAGCATCGTGTACAAAGCACCAGTGTCAGTCATCATCAAAAGGGCTTACCTGCATCCATGGGAAAACGCACCGGGGGGGCACCGTCAAATGCCTCTTATCCCAGGCCATCTGCTTCTCCCCTTTTTGCTTAA | 1245 | 0.461 | MGACWSNRIKAVSPSSTGFFSRSVSRDGCDTSSNSRNSSSSIPITPRSEGEILQSSNLKSFSYSELKTATRNFRPDSILGEGGFGSVFKGWIDEHSLVATKPGAGIVIAVKRLNQDGFQGHKEWLAEINYLGQLYHPNLVRLIGYCLEDEHRLLAYEFMSRGSVENHLFRRGSHYQPLSWSLRMKIALGAAKGLAFLHSTKPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEHNLVEWAKPYLSNKRRSFRVIDGRLEGQYPLSRAQRAAALAYQCLSAEPKFRPNMEEVVRALEQLQESKDMAKSSDKKEHRVQSTSVSHHQKGLPASMGKRTGGAPSNASYPRPSASPLFA | 414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele43g1315 | 414 | Coils | Coil | 348 | 368 | - | - | |
| Lele43g1315 | 414 | MobiDBLite | consensus disorder prediction | 361 | 379 | - | - | |
| Lele43g1315 | 414 | MobiDBLite | consensus disorder prediction | 15 | 48 | - | - | |
| Lele43g1315 | 414 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 111 | IPR017441 | GO:0005524 | |
| Lele43g1315 | 414 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 158 | - | - | |
| Lele43g1315 | 414 | CDD | STKc_IRAK | 79 | 358 | - | - | |
| Lele43g1315 | 414 | Pfam | Protein tyrosine and serine/threonine kinase | 77 | 355 | IPR001245 | GO:0004672|GO:0006468 | |
| Lele43g1315 | 414 | PANTHER | OS01G0588500 PROTEIN-RELATED | 34 | 359 | - | - | |
| Lele43g1315 | 414 | MobiDBLite | consensus disorder prediction | 361 | 414 | - | - | |
| Lele43g1315 | 414 | FunFam | Serine/threonine-protein kinase BIK1 | 39 | 158 | - | - | |
| Lele43g1315 | 414 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 | |
| Lele43g1315 | 414 | ProSiteProfiles | Protein kinase domain profile. | 73 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele43g1315 | 414 | SUPERFAMILY | Protein kinase-like (PK-like) | 38 | 355 | IPR011009 | - | |
| Lele43g1315 | 414 | FunFam | Probable serine/threonine-protein kinase PBL8 | 159 | 374 | - | - | |
| Lele43g1315 | 414 | Gene3D | Transferase(Phosphotransferase) domain 1 | 159 | 384 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele43g1315 | Lele-ChrLele43 | 21266244 | 21268846 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele43g1315 | 51 | 363 | Glycoside Hydrolase | AT3G07070 | 51.274 | 3.04e-110 | 328 |
Transcription factors information