Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1310 ATGGTGGATTGGGGAGCGAGTGACATCCTGACATTACATGGCTGCACATGGGCAGAACTTGATTCTAGCTCGATGTCTGGTCTGAAGCCCAATCCGAGCTACCCAAATTGCTCGGGTAGGGAGTTCGAAGTACAAGGGACTAAAACCCAAAACCCAAAAATCCCAGCAACCAGAAGTCTCAATGTGGTTTTTCCGTCTTGGTCGCCGTTGACGCCAAATGAAGAAGGTGAAGTCGCCATTGAAGCTCTGAAGAAGGTGAATCTTGGGGTTCTTCTAAGAAATCGTGATGTGCTCGATTTTTCAGCAGTGGAGAAGAAGATGGAGAGGAGGGGCGCTGCTGGGTTTGCATCCGATGAAAAGGAAAAGAATAATACTTCTACTAAACAACCGATGTTTGCCCCCAGAAAGAGTCACTTTTCTGGATTTCGACGGCTTATAGCCGGTGGTCCGTTCTTTCTCTCTCCTCAGAACCAAATGACAATGGATCGGGCTCTTTGGGGTTTTACCGATTCCAGAAGGGAACAACAATTGGGAAATCGATCTGTACCAATTCTGCAGCGGAATCAGGACTTTGAAAATGCCTTCTTTGATCACAGAAGGGAATTTCGTTTCCTTCAATCTGATCAATTACCAACCAATATGAATACACCTTCTTCCTCTACCGTCACCAACGAGGAGCATTCTCCAGAAGATTGTGATTTTTCTGATGCTGTTTTGAGTTACATAAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACGTGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCGCTGGGTGAGAAGTACCCACCTTCACCTACACAAAATCATCCAAGTCATAATGATGGCGGCATGGGGAATAATTTCCCCAGAAATTACAACTATGGTAATTTCAACAGCACTTTCATTCATCAGTCCTTGTCTCAAAATCCTAATGAGTTTCCCACGCAACTTATCCGAGGTAACGGTATTTCTCGGTCATCTTACAGCTCTTCGATCAGTGTTGTAAGTGGTGTGGAAGGGCCTGTGGATTCTCCAAGCAGTATTCATCAGGTTCCAGATCTGAACTGCGAGAGCCAATCGATCTCGCAATTTAACAAAGGCGTCGAGGAGGCTAGTAGGTTTCTTCCAAATGGGAACAAGTTGTTTGCTGATTTAGGTTTGTCTAATTTGTCACCAGAAGAACCACCAAAAGCAAGAGCTCATGAAATATTATCAGCCAAGGTGGAGAAAGATGAAGGTGATGATTTTCTCGGCAGGTCGAAGGTAAGAAAGCAGCCACACAGGGGAGAGGAAGATGATGAAGAAGAAGAAAAGTGTAGCAAGCAAGCAGCTGTTTATGCAGAACCAACGCTACGTTCTGTGATGTTCGATCTAGTGCTTCTTCATACTGATGGGGAAGGTAAGAACCATTACACGGCTCGTCGTGAAGCGTTGCAGAACAAGACCATCAAGGCGGTGATGCCAAACGGTGGTCAAGCGAAAGCTTCAAACACCAGTAAGGGGCGTGGGAAGAAACAAAATGGGAGAAAGGCGGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCTGTTGCAGCAGATGATCATAAGAGTGCACAAGAGTTGCTAAAGCAGATCAGGCAGCACTCGAATCCTTTTGGGGATGGAAATCAAAGGTTTGCACATGTCTTTGCCGATGGACTCGATGCACGCTTGGCTGGAACCGGTAGCCAGATTTATAAAGGACTCATCAGTAAAAAACGGTCAGCAGCTGATGTACTGAAAGCCTATCATCTCTACCTTGCTGCATGCCCTTTTAGGAAGATATCTAATTTTTTCTCAAATGTCACAATAAGGACAGCTTCCGAGAATTCAGCAAGGGTCCATATTATAGACTTCGGTATTCTTTATGGTTTCCAATGGCCAACTTTCATACAGAGACTAGTAATGAGAACAGGAGGGCAACCACCGAAAATCCGAATCACCGGAATAGACTTCCCACAACCTGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACAGGAAGACGGTTAGCAGATTATGCAAAAGCTTTCAATGTTCCATTTGAGTATGTTGCCATAGCAAAGAAATGGGAAACCATTACGCTTGAGGAACTCAAGATTGATAGGGACGAATTCCTGGTTGTGAACTGTTTATACAGAGCAAAGAACTTGTTAGATGAATCTGTGGCAGTGGAGAGTCCAAGGAATGCTTTCCTGAATCTGGTAAGAAAGATCAATCCGGATATATTCATTCACGGGATCATCAACGGGGCGTTCAACGCGCCTTTTTTCGTTACCAGGTTCAGGGAAGCCTTGTTTCATTACTCATCACTGTTTGATATGCTGGAGACAATCGTGCCGCGAGAGGACTGGGAGAGAATGCTGATAGAGAAGGAGATATTCGGGAGAGAAGCGTTGAACGTGATAGCATGCGAGGGATGCGAGAGATCGGAGAGGCCGGAGACATATAAGCAGTGGCAAGCTCGGATTCTAAGAGCAGGGTTTACACAGATTCCTTTTACTCGAGATCTAGTAGGGAGGGCAATGGAGAAGGTAAGGGGTAGCTACCACAAGGATTTTCTGATCGATGAAGACAACAAGTGGTTTTTGGCTGTGTTGGGCTTCCTTGTTCTCTTGATACAAGATCCATTCTATACTCTGGAGGGAGTATTTCTTAAGCTTTGGCATCAATGTGCATCTTTGCTCCTTTCATTCATTCATGGTATCAAGAAAAGTCAAAACTTGAGAGCATACAAACCAAATCATGATGATGAAGCGAGACATGAATTCTTGTTAAGGTTGAAACATGCGAATGATGAAGCAAACGTATGTTGGTTTAAGTAG 2883 0.4447 MVDWGASDILTLHGCTWAELDSSSMSGLKPNPSYPNCSGREFEVQGTKTQNPKIPATRSLNVVFPSWSPLTPNEEGEVAIEALKKVNLGVLLRNRDVLDFSAVEKKMERRGAAGFASDEKEKNNTSTKQPMFAPRKSHFSGFRRLIAGGPFFLSPQNQMTMDRALWGFTDSRREQQLGNRSVPILQRNQDFENAFFDHRREFRFLQSDQLPTNMNTPSSSTVTNEEHSPEDCDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSPTQNHPSHNDGGMGNNFPRNYNYGNFNSTFIHQSLSQNPNEFPTQLIRGNGISRSSYSSSISVVSGVEGPVDSPSSIHQVPDLNCESQSISQFNKGVEEASRFLPNGNKLFADLGLSNLSPEEPPKARAHEILSAKVEKDEGDDFLGRSKVRKQPHRGEEDDEEEEKCSKQAAVYAEPTLRSVMFDLVLLHTDGEGKNHYTARREALQNKTIKAVMPNGGQAKASNTSKGRGKKQNGRKAVVDLRTLLVLCAQAVAADDHKSAQELLKQIRQHSNPFGDGNQRFAHVFADGLDARLAGTGSQIYKGLISKKRSAADVLKAYHLYLAACPFRKISNFFSNVTIRTASENSARVHIIDFGILYGFQWPTFIQRLVMRTGGQPPKIRITGIDFPQPGFRPAERIEETGRRLADYAKAFNVPFEYVAIAKKWETITLEELKIDRDEFLVVNCLYRAKNLLDESVAVESPRNAFLNLVRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYKQWQARILRAGFTQIPFTRDLVGRAMEKVRGSYHKDFLIDEDNKWFLAVLGFLVLLIQDPFYTLEGVFLKLWHQCASLLLSFIHGIKKSQNLRAYKPNHDDEARHEFLLRLKHANDEANVCWFK 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1310 960 MobiDBLite consensus disorder prediction 282 301 - -
Lele43g1310 960 ProSiteProfiles GRAS family profile. 517 909 IPR005202 -
Lele43g1310 960 MobiDBLite consensus disorder prediction 109 134 - -
Lele43g1310 960 MobiDBLite consensus disorder prediction 499 519 - -
Lele43g1310 960 MobiDBLite consensus disorder prediction 419 452 - -
Lele43g1310 960 Pfam GRAS domain family 526 883 IPR005202 -
Lele43g1310 960 MobiDBLite consensus disorder prediction 109 125 - -
Lele43g1310 960 MobiDBLite consensus disorder prediction 277 301 - -
Lele43g1310 960 MobiDBLite consensus disorder prediction 210 225 - -
Lele43g1310 960 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 443 870 IPR005202 -
Lele43g1310 960 MobiDBLite consensus disorder prediction 210 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1310 Lele-ChrLele43 21227719 21234894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1310 205 883 GRAS Transcription Factor Family AT2G37650 52.299 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele43g1310 GRAS 2e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0050 41 361400 363634 Lele43g1310 43 21227719 21234894 hybridization
Lele42g0050 42 381447 383543 Lele43g1310 43 21227719 21234894 hybridization