Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1307 ATGGAAGAAGCTTTAAGGAGTGCCTGGTCAGATGAAGAGGAGCTTTTGAGAGAGATAACAGAAGAAGCAGTTGATGAGAATTACTATACGAGAAAATCATGTGAAGAGCAAGCCATTATTAATAGGTTCATCTCCAACATCTACTCAGGACCTACCATTTCTGATATTGAGAATGCCTTATCAGTCACCACATCCCACCAAAGAGACAATTTCCACCAACTGGTCGCTTCACCACCCAGCAGAGTTTGCATATTGGAAAAAGGTTTGAATTTGAGCAGGAGTGAGAATAAGTATACCCTGAAAATCAAGTGCTATGGCAATGGCGGATTGAGTGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCTATTAAGAACAGCCCAAATCCTAGGTAA 399 0.4085 MEEALRSAWSDEEELLREITEEAVDENYYTRKSCEEQAIINRFISNIYSGPTISDIENALSVTTSHQRDNFHQLVASPPSRVCILEKGLNLSRSENKYTLKIKCYGNGGLSDDGYKWRKYGQKSIKNSPNPR 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1307 132 ProSiteProfiles WRKY domain profile. 106 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g1307 132 Gene3D WRKY domain 99 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g1307 132 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 132 IPR044810 GO:0003700
Lele43g1307 132 Pfam WRKY DNA -binding domain 112 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g1307 132 SUPERFAMILY WRKY DNA-binding domain 108 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1307 Lele-ChrLele43 21200358 21200838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1307 36 132 WRKY Transcription Factor Family AT5G43290 51.020 3.48e-20 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele43g1307 WRKY 2.6e-07 CL0274