Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1289 ATGGACAATCTGTATTTCACTATTTCGACTTTTGTTGGTTCTTGGCTCGGCATTTGCGTTATGAATGCAAGGCATATGATAGAATCCCGAGGAGAGGATTCCCTTGAATTCCTTGTCCCACGCGCTCGCTCCTCCCGATCAGCTCATGTCCCTGTCTCTGGCCCCCCGAAATCCACTCTCCTATCAATTCCAGTTTTATTTTTTTCAAGTCCGCAAAGGAACAACTCATACGCAGAGCGAGAGATTTTGAGTGTGCTGGTGGGCTCCTCTGTGGCTCAAGATCACTTCGATTATGGTGTTGCTTCGAGGACTTTGACCTGGGAAGACGGATACTATGGTGATTTGAAAACCAATGAGGCTGTGGAAGCTATGTGGACGGAGGTGGCTTCTTCAAGTTCTGAAGAGAATTCTGTTAGATTACACATGACTGAAATGTCTCATCTGACGTACATATTGGGAGAGGGGGTTGTTGGCAAAATAGCTCTTACCGGGGATCATTGTTGGATTTTATTTGAAGATATTCTAACTGGCAAATTCCAGACCATGTTGATTAATGAGTATCCATATGAATGGCTTCTTCAATTTGCATCAGCTATCAAGGTTACTGAAGACCTGGCATTTGTTGCCAATGTCAAGGAGCAATTCAATTTCTTTCATTGTGTAATGGGCAACACTTCGACTTTGAGCTCAGATGAAAATATTCAGGATTGGTCATTCTCAGCTCTAACAGATTGCCCTCCGGATAATTCAGATGTATCATCTGTTACAAATAGTATCCTGACACGTGAACTATTGGGTGGCAATTCACTTAATATAAATGAATTGAGGTCGAATCCAACTGTCCATTTTCCGTTGGATTCTGAATTACACAAAGCACTAGGATCTGTTGCTAATATACAAACTTCTGAACCTGAGTCAGAAAATTTCTCTTTTAAGGATACACACAGTACTAGCTCCATGTTGATATCTGGTGAAAGAGAGCATGGTCATATTATGGGCATACAATTTTCTGACAAACACAAATCAGAATATCTTTTGGATGCAATTGTTGGCAATTTACGTGGTGCCTTCAATGATTCTTCATCCACGTTGCCAACAGTATTAACTGCTTCAATTCATCCACAAAGTCATTCTAAGGGAAGCACTTTGATAGTAAATACTGCTACTGATTCAAGTAGCCATCTTACATCTGCATTTGGGGCCAACATAGATGATTGTACTGATCTTCTAACATTGGCATCTTTGGATGACAGTTCAAGCATATTGCTTGATGGGACACAGCAAGAATCTGTTCATGTTCATAAACAGCCTAAGAGTGGACCGAAATTCTCTAGTATTGGCAAGAAAAGAGCCCGCGCGGGAAATACACCAAGGCCAAGACCTAGGGATAGACAATTGATTATGGACCGCATGAAGGAGCTGAGGGAACTTGTCCCAGATGGTGCTAAGGCAAGTTGA 1458 0.4184 MDNLYFTISTFVGSWLGICVMNARHMIESRGEDSLEFLVPRARSSRSAHVPVSGPPKSTLLSIPVLFFSSPQRNNSYAEREILSVLVGSSVAQDHFDYGVASRTLTWEDGYYGDLKTNEAVEAMWTEVASSSSEENSVRLHMTEMSHLTYILGEGVVGKIALTGDHCWILFEDILTGKFQTMLINEYPYEWLLQFASAIKVTEDLAFVANVKEQFNFFHCVMGNTSTLSSDENIQDWSFSALTDCPPDNSDVSSVTNSILTRELLGGNSLNINELRSNPTVHFPLDSELHKALGSVANIQTSEPESENFSFKDTHSTSSMLISGEREHGHIMGIQFSDKHKSEYLLDAIVGNLRGAFNDSSSTLPTVLTASIHPQSHSKGSTLIVNTATDSSSHLTSAFGANIDDCTDLLTLASLDDSSSILLDGTQQESVHVHKQPKSGPKFSSIGKKRARAGNTPRPRPRDRQLIMDRMKELRELVPDGAKAS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1289 485 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 102 215 IPR025610 -
Lele43g1289 485 MobiDBLite consensus disorder prediction 427 466 - -
Lele43g1289 485 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 101 200 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1289 Lele-ChrLele43 21086883 21091865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1289 119 485 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G64625 24.242 3.31e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1289 43 21086883 21091865 Lele43g1289 43 21086883 21091865 ECH
Lele41g0070 41 514888 520098 Lele43g1289 43 21086883 21091865 hybridization
Lele42g0071 42 507838 512040 Lele43g1289 43 21086883 21091865 hybridization