Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1278 ATGGCTCAGTGTCGGGGCGCTTTGGTAGGAGACTACATCGTCGGGAAGCAAATTGGGTCCGGGTCTTTCTCGGTGGTGTGGCATGGTAGGCACCGAGTCCATGGAACTGAGGTTGCCATTAAAGAAATCGCCACCGGTCGGCTTAACAAGAAGTTGCAGGAGAGTCTCATGTCGGAGATTTTTATCTTGAAGAAGATTAACCATCCTAATATAATTCGTTTGCACGATATAATTGAGATTCTCCTGATAAGAAATGTTCCTGGGAAAATACATCTTGTGTTAGAGTACTGTAAAGGGGGCGATCTCTCTATGTATATACAGCGCCATGGAAGAGTTCAAGAGGGAACTGCAAAGCATTTTATGCAACAGCTAGCTGCTGGCCTACAAGTTCTTCGAGAAAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTTCTCACCAGAAATGATGACAAGTCAGTTCTGAAGATTGCTGATTTTGGATTTGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTATGACGCTAAGGCAGACCTGTGGAGTGTGGGTGCAATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACTGGGAATAATCAAATACAGTTACTACAGAACATTGTGAAATCAACTGAACTGCAGTTCCCATCCGATAATCAAAGTTTGAGTTCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGACGTAGTCCAGACTGCTTACCTTTCTTTTTGGATGATGGTTCTTGTGGTCCTGAGGGAAGCCCATCTTTTTCAAGGAAGAAATCCTCAATAAAGTCTACCTATGGATTTGACCTTAATACACAGCAAGATAGAGCAGGCTCAGCATTTGCTGCTTCTAATAACATAAATTTTACTTACCGACAGCAACCTGAAAACAGTGCTATAATGTTGGACAGCCATCGAACCTCAGCAAGAAATCTCGCTGATCCTCTAGAATCTATAGAACAGAGATTAGCAAAAACAGACTCACTGGAGAATATTGATCAAGATTATGTTCTCGTGTCTGGACCTCCTATGGAAGGATCATCATCTTCAGTGAGTGCATCAAAGCCAAGCCATTTTGCATATAGATCAGGTGCTTCCCTACCGGAGTCTTCTAATGTAATTGATAGAGTAAGTTCTCCAATGCCAATAATTGGAAGTTCAGAAAGTAAGGACTCTGCTCCAGGGACTTCACATGCGTCAATGGATACTGGAGATGAACAGCCATCAGCTGACTGCATGACCAGGATAAAATCATTGCAACAATGTGCATCCACCATAACTGAATTAGTTCACGAAAAGGCTGCCTCTGCCATGGAAGGAAGTCCAAGTCAAGAAACAACTAGATGTAGGAGGAGCACTAACATGAAGCATGGTAGTTCTGATTCAGAAGAATGCCTTGAAGGAAATGTGCAAGGGCCAAAGGATATTCTATCTCAAATTGAAAGTGAATTTCTAAGGGAATTTGAGCATGCTGAAGAACTTGCTAAGGCTGTTGAACCGGGAAATACAGAGATGCCAGATGCAATGGAAACAATATTTCAGTCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTCATGGGCGAAATGGATAGTGCAGCTGCATTGTATTCGAAAGCTGTGCTACTACTGGTGTTCCTTCTAGTGGAAGCTCCATCCCTCATTCTAAACCCCCCATTTTCACTGACTAACACGGATCGGTACAGGCTTCGGACTTACATCGATATTCTAAACAACAGGCAAGGCTATTCGAGGTCTCAACGAATGACGCTGCTGAAATGTGACAAAACACAAGGCGGCCTTAAGAACAAGTTTTAG 1899 0.4281 MAQCRGALVGDYIVGKQIGSGSFSVVWHGRHRVHGTEVAIKEIATGRLNKKLQESLMSEIFILKKINHPNIIRLHDIIEILLIRNVPGKIHLVLEYCKGGDLSMYIQRHGRVQEGTAKHFMQQLAAGLQVLRENNLIHRDLKPQNLLLTRNDDKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIVKSTELQFPSDNQSLSSECKDLCQKLLRRSPDCLPFFLDDGSCGPEGSPSFSRKKSSIKSTYGFDLNTQQDRAGSAFAASNNINFTYRQQPENSAIMLDSHRTSARNLADPLESIEQRLAKTDSLENIDQDYVLVSGPPMEGSSSSVSASKPSHFAYRSGASLPESSNVIDRVSSPMPIIGSSESKDSAPGTSHASMDTGDEQPSADCMTRIKSLQQCASTITELVHEKAASAMEGSPSQETTRCRRSTNMKHGSSDSEECLEGNVQGPKDILSQIESEFLREFEHAEELAKAVEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMDSAAALYSKAVLLLVFLLVEAPSLILNPPFSLTNTDRYRLRTYIDILNNRQGYSRSQRMTLLKCDKTQGGLKNKF 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1278 632 ProSiteProfiles Protein kinase domain profile. 12 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1278 632 Gene3D Transferase(Phosphotransferase) domain 1 4 304 - -
Lele43g1278 632 CDD STKc_ATG1_ULK_like 18 260 - -
Lele43g1278 632 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1278 632 FunFam Maternal embryonic leucine zipper kinase 5 262 - -
Lele43g1278 632 MobiDBLite consensus disorder prediction 405 434 - -
Lele43g1278 632 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele43g1278 632 MobiDBLite consensus disorder prediction 405 429 - -
Lele43g1278 632 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 541 IPR045269 GO:0004674|GO:0006914
Lele43g1278 632 MobiDBLite consensus disorder prediction 459 494 - -
Lele43g1278 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele43g1278 632 SUPERFAMILY Protein kinase-like (PK-like) 8 261 IPR011009 -
Lele43g1278 632 Pfam Protein kinase domain 13 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1278 Lele-ChrLele43 21012498 21019534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1278 7 261 CBL-interacting serine-threonine protein kinases AT2G30360 37.165 2.82e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele43g1278 Pkinase 1.5e-65 CL0016