Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1260 ATGGAAGTAGATGAAAAACCCGTCATTGAGCTCGACAGACCAACTGCCGCTGACGTTGGTGGAGGCGGAGACGGCGGTAGTGGCGACGAGGGTTTGACAGCGTTAGGTGACGGGGATGGGAGTAGCTCCCAGGGGGCTAAAGACAGAGTGAAGGGTCCTTGGTCTCCAGAGGAGGACGCGATACTGAGCCGACTTGTTAGCAAGTTCGGGGCCCGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCTTGCCGGCTCCGGTGGTGTAATCAACTCGACCCAGCTGTGAAGCGCAAGCCCTTTACTGATGAGGAGGATCGGATCATAGTTGCAGCACATGCAATCCATGGGAACAAATGGGCTGCCATAGCCAGACTTCTACCAGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTCTGAGGCGTCGGGGAATAGAACTTGGTAAAGTTAAATTAGAAGCTTGCAACATGTTAGAAGATGTCAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAAACTCAGTCATGTGGGGATGTTAATTCCTTGAGATCCTCAGAAGGAAGAGATGCCAGTTCTGTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGACAGAGAGTCAAATGAACCATGAAGTCAAGGATCCACCCACTCTTTTCCGACCTCTAGCACGTATAAGTGCTTTTAGTGTATATAACTCATTGGATGGTTCACAAGCCACTACGTCAGCCTCTAGGCCAGTTCCAATGCAAGGACCTCTTTTTCAAGCATCAAAGCCAGGTATTGAAATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTTCCTAATCACTGTGGCCATGGTTGTTGCACTGATCGGAGTGGTGAAAAAGCCAAAAGCTCGTTGTTGGGGCCAGAATTTATTGAATTTTCAGAGCCCCCATCATTCCCAAGTTTTGAGTTGGCTGCCATAGCTACAGACATCAGTAACCTTGCTTGGCTGAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGACTCAACCGGCAGGGTGATATCTCAGGGATCTTAA 1095 0.4749 MEVDEKPVIELDRPTAADVGGGGDGGSGDEGLTALGDGDGSSSQGAKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIELGKVKLEACNMLEDVSLEKAKASSEETQSCGDVNSLRSSEGRDASSVENMEDKYEDKAQTESQMNHEVKDPPTLFRPLARISAFSVYNSLDGSQATTSASRPVPMQGPLFQASKPGIEICKMLDGIYGCDLSVPNHCGHGCCTDRSGEKAKSSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSTGRVISQGS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1260 364 FunFam MYB transcription factor 51 102 - -
Lele43g1260 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 152 IPR017930 -
Lele43g1260 364 MobiDBLite consensus disorder prediction 174 208 - -
Lele43g1260 364 MobiDBLite consensus disorder prediction 1 54 - -
Lele43g1260 364 MobiDBLite consensus disorder prediction 176 197 - -
Lele43g1260 364 FunFam Transcription factor MYB44 105 151 - -
Lele43g1260 364 PANTHER MYB PROTEIN-RELATED 51 206 - -
Lele43g1260 364 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Lele43g1260 364 Pfam Myb-like DNA-binding domain 54 111 - -
Lele43g1260 364 CDD SANT 53 95 IPR001005 -
Lele43g1260 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 101 IPR017930 -
Lele43g1260 364 SMART sant 102 150 IPR001005 -
Lele43g1260 364 SMART sant 50 99 IPR001005 -
Lele43g1260 364 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
Lele43g1260 364 Gene3D - 50 102 - -
Lele43g1260 364 CDD SANT 105 148 IPR001005 -
Lele43g1260 364 Gene3D - 105 151 - -
Lele43g1260 364 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1260 Lele-ChrLele43 20839005 20841751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1260 40 364 MYB Transcription Factor Family AT3G09230 51.343 5.48e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele43g1260 Myb_DNA-bind_6 1.1e-15 CL0123