Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1247 ATGGACTTGAATGCCTCACCCGTTCCAGAGGAAGATGAGGACCCATTTGAGGGCCATGTAGAATACTTTGCTGCACAAGAAGAACGCGCAGAAACTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAAAGACGTTTGAAAAGAGAACGTCCAGATGACAGATCTGTTTATGTATCCCCTTCTCCTGGTTATGATCAACTATTTCAAACGAAGTCCCTTAAATCACAAGATAGAAGTAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCAGGAAATTTTTTGCATGATACCTTCTAAGGTTCCGCTTGGTGAATCGTTCAATGATTGTGTTGCTCCTGGTAAAAGATACTCATTCAAACAAGTGATGCATCAACAAAGAGTTTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGGTATTATCCAGTGTCAGATCTAAAGAAAGAGGGTATCAAGCATGTAAAGATCCAATGCAAGGGGCGTGATTCGGTACCTGATAACTTATCTGTGAATCAATTCGTCCATGAGGTTACACAATTTCTATCACGTCAAAAACACTCAAAGAAATATATACTTGTCCATTGTACACATGGACATAATCGTACTGGATACATGATCATCCATTATCTTATGCGTGCAATGCCAATGTCAGTCACGCAGGCAATAAAAAATTTTTCTGATGCACGCCCTCCTGGAATCTACAAACCTGATTACATTGATGCCTTATACACATTTTATCATGAAAAAAGGCCTGACATGGTGGCTAGAGGACATTCACAATTTCCAGGGTCACACCCAGTTTCTCTGAACAGGGAAAGTTTGCAGTTATTACGGCAGCGTTATTATTATGCAACTTGGAAAGCTGATGGAACACGATATATGATGCTGATAATGATGGATGGCTGTTACTTAATTGATAGAAGTTTCAATTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGGCACAAATGATGTGTTGGCCGAGAAGACCCACCATTACACATTACTTGATGGGGAGATGATTATTGATACTTTGCCTGATTCAAAGAAGCAGGAGAGGAGATACCTTATATATGATCTAATAGCCATCAACCAAGTATCAGTAATAGAGCGACCTTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACAAAGCTCTTATCAGAATTCATTCCAAAACTCTCTCATGCTGCTGACGGCCTCATATTTCAGGGCTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTCTTGAAGTGGAAATATCCTGAGATGAATTCAGTTGATTTCCTCTTTGAGATTGATGATGATGGTGAGAAACTTTTTCTTTATGAACGGGGAAAGAAGAAGCTCATGGAAGGGAATAGGGTAGCATTCAAAGATGGTTCAGATCCCTCATTTTATTCTGGAAAGATCATAGAGTGTTCTTGGGGTTCTGATAACCATGAATGGGAATTCATGCGAGTGAGAACTGATAAATCAACTCCCAATGAGTTCAATACTTTCAAGAAGGTGATGCGAAGCATAAAAGACAATATTACAGAAGATGTTTTGTTGAATGAGATATCCGAGATTATTCGCCTTCCCATGTATGCCGACAGGATAAGAATTGACAGTAAAGCCCACCATCATACTAACTCAGCACGGAGAAGGTGA 1809 0.4057 MDLNASPVPEEDEDPFEGHVEYFAAQEERAETAVDIARREREERKRRLKRERPDDRSVYVSPSPGYDQLFQTKSLKSQDRSRLPPGWLDCPSFGQEIFCMIPSKVPLGESFNDCVAPGKRYSFKQVMHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLSVNQFVHEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAMPMSVTQAIKNFSDARPPGIYKPDYIDALYTFYHEKRPDMVARGHSQFPGSHPVSLNRESLQLLRQRYYYATWKADGTRYMMLIMMDGCYLIDRSFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTLPDSKKQERRYLIYDLIAINQVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLSEFIPKLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDGEKLFLYERGKKKLMEGNRVAFKDGSDPSFYSGKIIECSWGSDNHEWEFMRVRTDKSTPNEFNTFKKVMRSIKDNITEDVLLNEISEIIRLPMYADRIRIDSKAHHHTNSARRR 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1247 602 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 180 249 IPR000387 GO:0016311|GO:0016791
Lele43g1247 602 Gene3D DNA ligase/mRNA capping enzyme 253 472 - -
Lele43g1247 602 MobiDBLite consensus disorder prediction 31 64 - -
Lele43g1247 602 Gene3D Protein tyrosine phosphatase superfamily 77 252 IPR029021 -
Lele43g1247 602 PANTHER MRNA-CAPPING ENZYME 78 584 - -
Lele43g1247 602 PIRSF mRNA_capping_HCE 69 266 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele43g1247 602 PIRSF mRNA_capping_HCE 264 602 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lele43g1247 602 ProSiteProfiles Dual specificity protein phosphatase domain profile. 112 261 IPR020422 GO:0006470|GO:0008138
Lele43g1247 602 Pfam mRNA capping enzyme, catalytic domain 274 472 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele43g1247 602 CDD Adenylation_mRNA_capping 265 473 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lele43g1247 602 FunFam mRNA capping enzyme, putative 246 470 - -
Lele43g1247 602 MobiDBLite consensus disorder prediction 31 57 - -
Lele43g1247 602 SUPERFAMILY Nucleic acid-binding proteins 475 586 IPR012340 -
Lele43g1247 602 ProSitePatterns Tyrosine specific protein phosphatases active site. 202 212 IPR016130 GO:0016311|GO:0016791
Lele43g1247 602 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 83 263 IPR029021 -
Lele43g1247 602 Pfam Dual specificity phosphatase, catalytic domain 133 255 IPR000340 GO:0008138|GO:0016311
Lele43g1247 602 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 253 473 - -
Lele43g1247 602 Coils Coil 27 47 - -
Lele43g1247 602 FunFam mRNA capping enzyme family protein 471 579 - -
Lele43g1247 602 SMART dsp_5 117 257 IPR020422 GO:0006470|GO:0008138
Lele43g1247 602 ProSiteProfiles ATP-dependent DNA ligase family profile. 356 500 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lele43g1247 602 FunFam mRNA capping enzyme family protein 79 282 - -
Lele43g1247 602 Gene3D - 473 564 IPR012340 -
Lele43g1247 602 Pfam mRNA capping enzyme, C-terminal domain 477 570 IPR013846 -
Lele43g1247 602 CDD RNA_5'-triphosphatase 86 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1247 Lele-ChrLele43 20764025 20772042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1247 254 602 Protein tyrosine phosphatase (PTP) family AT3G09100 72.571 4.06e-179 521