Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1239 ATGCCTTCTTCTTCTTCCACCATCATCGTCTCCAAATGCACTGTTTACCCTAATCAGCCCTCCTCCCTCAAATCCCTCAAGCTCTCCGTCTCCGACCTCCCCATGCTCTCTTGCCACTACATCCAAAAGGGGATCCTCCTCCCTCCGCCTCCTTTCTCCTTCCCTGATCTCCTCCTCTCCCTTAAGCGCTCTCTTTCCAACACTCTCTCCTTTTTCCCTCCCCTCGCCGGCCGCCTCTTCACTGATTCCGACGGCTATGTCCATATTCAGTGCAACGACGCTGGCGTCGACTTCATCCATGCCTCCGCTAAACACCTTGCCACCCATTCCATCCTTTACTCTCCCACACTCACTGACGTCCCCAATTGCTTTAAGCGGTTCTTCGCCTACAGCAAGACTATCTCCTACTCCGGCCACACTCTCCCCCTTGTCGCCGTCCAAGTTACTGAACTCGCTGATGCGGTTTTCATCGGATGCACTGTTAATCATGCCATTGTCGACGGCACTTCCTTATGGCATTTCTTCAACACCTTCGCTGAGATCAGCAAAGGAGCCAAAATTTCCAAATCCCCGGACTTCACTCGCGACACCGTTTTCAACTCCTCCGCCGTACTTAAAGTCCCAGACGGTGGCCCCAAGGTCACGTTCGACGACGAACAGCCGTTGAGGGAGAGAGTGTTCCGTTTTAGCCGGGAAGCAATTCAAAAAATTAAACTCAGAGCTAATCACTATGGCGGGAACGGTTTCAAGGATTCTAAAGAGTTCGTTGAGAAGCAAGTTAACGGCAAGATAACGCCCGTCACGGCGAACGGGATAGCCCACAAGACGGAAGAGATTTCGTCGTTTCAATCACTGTCCGCACAGCTGTGGCGTTCTGTTACACGTGCGAGGAAGTTGGACCAGCACAAAAAGTCGACGTTTCGCATGGCGGTGAACTGCCGCCGCCGTCTGGAGCCTAAGATGGACGCTTATTACTTTGGGAACGCGATACAGAGCATCCCGACCGTTGCTGAGGTCGGAGAGATTCTGTCTCGGGATCTACGGTGGTGTGCGGATCTTCTGCACAAAAACGTTGTCGCACACGACGACGCTACGGTGCGACGCGGCATAGAGGATTGGGAGAAAGCCCCCAGGCTGTTTCCGCTGGGTAACTTCGACGGTGCTTCGATGACCATGGGTAGCTCTCCACGTTTTCCGATGTACGACAATGACTTTGGGTGGGGCCGACCATTGGCGATTAGGAGCGGGAAGGCCAACAAGTTTGACGGTAAGATCTCTGCGTTTCCAGGGAGAGAAGGAAACGGGAGCGTTGAATTGGAAGTCGTTTTGGCTCCCGAAACGATGGCGGGGCTTGAAAACGACATTGAGTTCATGCAGTACGTAACGGGAATGATGTGA 1398 0.5322 MPSSSSTIIVSKCTVYPNQPSSLKSLKLSVSDLPMLSCHYIQKGILLPPPPFSFPDLLLSLKRSLSNTLSFFPPLAGRLFTDSDGYVHIQCNDAGVDFIHASAKHLATHSILYSPTLTDVPNCFKRFFAYSKTISYSGHTLPLVAVQVTELADAVFIGCTVNHAIVDGTSLWHFFNTFAEISKGAKISKSPDFTRDTVFNSSAVLKVPDGGPKVTFDDEQPLRERVFRFSREAIQKIKLRANHYGGNGFKDSKEFVEKQVNGKITPVTANGIAHKTEEISSFQSLSAQLWRSVTRARKLDQHKKSTFRMAVNCRRRLEPKMDAYYFGNAIQSIPTVAEVGEILSRDLRWCADLLHKNVVAHDDATVRRGIEDWEKAPRLFPLGNFDGASMTMGSSPRFPMYDNDFGWGRPLAIRSGKANKFDGKISAFPGREGNGSVELEVVLAPETMAGLENDIEFMQYVTGMM 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1239 465 Gene3D - 220 458 IPR023213 -
Lele43g1239 465 Pfam Transferase family 9 458 - -
Lele43g1239 465 Gene3D - 7 210 IPR023213 -
Lele43g1239 465 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1239 Lele-ChrLele43 20688598 20689995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1239 61 452 Monolignol Biosynthesis Gene Families AT5G48930 26.265 1.56e-38 143