Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1207 ATGGGGAATTGTTGCAGATCTCCGGCTGCTTTTGCCAGGGAGGATGTAAAATCCAACTTCTCTGGCCACGATCACGGCAAGAGGGACTCCAACGCCGCCAAGAAGAATCGGGTTACGGTTCTTACGGACGTGCCCAAGGAGAATATAGAGGAGAAGTACTTGGTGGATCGGGAGCTTGGTCGAGGTGAGTTTGGTGTTACTTATCTGTGTATTGAGCGGGAAACTAGGGAGCTACTGGCTTGCAAGAGCATTTCCAAGCGGAAACTCAGGACTGCGGTCGACATTGAGGATGTTAGGCGTGAGGTGGCCATTATGAAGCACTTGCCCAATAGTTCCAGCATTGTGAGCTTGAAGGAAGCTTGTGAGGACGACAATGCCGTGCATTTGGTCATGGAATTGTGCGAGGGTGGTGAACTGTTTGATCGCATTGTGGCACGTGGCCATTATACTGAACGAGCTGCTGCTGCGGTCACAAGGACGATTGTGGAAGTCGTACAACTTTGTCACAAACATGGGGTTATTCATAGGGACTTGAAGCCGGAGAATTTTTTGTTCGCCAATAAGAAAGAGAATTCACCTTTGAAGGCTATCGATTTTGGCCTGTCTATATTCTTCAAGCCAGGCGAGAGATTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGGCCAGAAATAGATATCTGGAGTGCGGGAGTAATTCTATATATCTTGCTCTGTGGTGTTCCCCCATTTTGGGCAGAATCCGAGCAAGGGGTTGCACAGGCTATTCTTCGAGGTCTCATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCAGAGAGTGCCAAAAGTCTTGTTAGGCAAATGTTAGAACCAGATCCCAAGCTTCGACTAACAGCCAAGCAGGTGCTTGAGCATCCTTGGCTTCAAAATGCTAAGAAGGCTCCTAACGTTCCCCTTGGTGATGTAGTCAAGTCTAGGCTTAAGCAATTTTCAATGATGAACAGATTCAAAAGAAAAGCCCTGAGGGTTGGTTGCATCTCTGTCATTGCTGATTTCTTATCCACTGAAGAAGTTGAAGACATCAAAGAAATGTTCAAGAAGATGGACAGTGACAATGATGGCATCGTTTCTGTTGAAGACCTAAAAGCTGGATCTCAAAATTTTGGATCTCAACTTGCAGAGTCTGAAGTTCAGAGTCTGATTGAAACCGTAAATACTAATGAGAAGGGAACACTTGACTACGGAGAATTTGTTGCTGTTTCTCTGCATTTAAAACGGATGGCTAATGATGAGCATCTTCGCAAAGCCTTCTCCTATTTCGACAAAGATGGGAATGGGTATATTGAACCAGATGAGCTGCGGGATGCGTTGACAGAAGACGGTGCAGATGATTGTACAGATGTAGCAAATGATATTTTCCAGGAAGTAGACGCAGACAAGGATGGCCGTATCAGCTATGATGAATTTGTTGCGATGATGAAAACCGGAACAGATTGGAGGAAAGCCTCTAGACATTATTCACGAGGGAGATTCAACAGCTTGAGCTTGAAGTTGATGAAAGATGGTTCTGTAAACTTAGGGACTGAGTAATGTTTGCCTATTGACCTGGTGCCGTGCAAGTCAGGGAAGGAGCTGCATGCGCCTATATACAAGCCTTTGTTGCTTCCATTAAAACAAGCTGCCTTGGAGCCATTGGTGTGTGACATGTATGATTCCTGTCTTTTAACTTCTCTCACCCATCTGTTCTGGTTAAAAATGTTGAATCAAACTGCTTAG 1785 0.4527 MGNCCRSPAAFAREDVKSNFSGHDHGKRDSNAAKKNRVTVLTDVPKENIEEKYLVDRELGRGEFGVTYLCIERETRELLACKSISKRKLRTAVDIEDVRREVAIMKHLPNSSSIVSLKEACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVRQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVGCISVIADFLSTEEVEDIKEMFKKMDSDNDGIVSVEDLKAGSQNFGSQLAESEVQSLIETVNTNEKGTLDYGEFVAVSLHLKRMANDEHLRKAFSYFDKDGNGYIEPDELRDALTEDGADDCTDVANDIFQEVDADKDGRISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSVNLGTEXCLPIDLVPCKSGKELHAPIYKPLLLPLKQAALEPLVCDMYDSCLLTSLTHLFWLKMLNQTA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1207 594 SUPERFAMILY Protein kinase-like (PK-like) 39 337 IPR011009 -
Lele43g1207 594 FunFam Calcium-dependent protein kinase 7 320 500 - -
Lele43g1207 594 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 492 - -
Lele43g1207 594 Pfam EF-hand domain pair 362 422 IPR002048 GO:0005509
Lele43g1207 594 Pfam EF-hand domain pair 434 497 IPR002048 GO:0005509
Lele43g1207 594 ProSiteProfiles EF-hand calcium-binding domain profile. 359 394 IPR002048 GO:0005509
Lele43g1207 594 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Lele43g1207 594 FunFam Calcium-dependent protein kinase 1 55 138 - -
Lele43g1207 594 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Lele43g1207 594 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1207 594 SMART efh_1 435 463 IPR002048 GO:0005509
Lele43g1207 594 SMART efh_1 399 427 IPR002048 GO:0005509
Lele43g1207 594 SMART efh_1 471 499 IPR002048 GO:0005509
Lele43g1207 594 SMART efh_1 363 391 IPR002048 GO:0005509
Lele43g1207 594 FunFam calcium-dependent protein kinase 13 139 319 - -
Lele43g1207 594 SUPERFAMILY EF-hand 350 523 IPR011992 -
Lele43g1207 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lele43g1207 594 CDD STKc_CAMK 52 310 - -
Lele43g1207 594 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Lele43g1207 594 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Lele43g1207 594 Gene3D Phosphorylase Kinase; domain 1 54 138 - -
Lele43g1207 594 CDD EFh 435 497 IPR002048 GO:0005509
Lele43g1207 594 ProSitePatterns EF-hand calcium-binding domain. 444 456 IPR018247 -
Lele43g1207 594 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Lele43g1207 594 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1207 594 Pfam Protein kinase domain 55 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1207 594 Gene3D Transferase(Phosphotransferase) domain 1 139 319 - -
Lele43g1207 594 Gene3D - 320 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1207 Lele-ChrLele43 20411737 20416067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1207 1 417 EF-hand Containing Proteins AT3G51850 85.646 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele43g1207 Pkinase 4.4e-74 CL0016