Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1206 ATGGATCATATTCAGCATCGTCATCATCATCTTCTTCATCAGCATCCACAACAACAACATCATCTTCCTCAGCCTCAGCCTGGTATTACCATGAATAACGTCGATGTGAGTAGTGGCGGCGCCGTCGTAGTCGACAGGTTGCCGCAGTGGAGCGTGCAAGAGACGAAGGAGTTTCTGGCGATTCGAGCAGAGTTAGATCAGAATTTCATGGAGACAAAGAGGAACAAGCAGCTATGGCAACTCATCTCTAACGCCATGACCGATAAGGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACAGCAGAGCCAGAAAGTGTAAGACAGCAATTCCCATTTTACAATGAGCTTCAAGCGATTTTCACTGCGAGGATGCAGAGAATGCTGTGGGCGGAGGCAGGAGGAGGAGGAGGAGGAGCGAAGAAGAAGACGGCGAAGGCGGCAATCAACGCGTCGTCGGAAGATGAAGAAGACGACAACGAAGAGATAAGCACTGATCATCATCAGGGAGAGAGGAGCTCGAGGAAGAAGATGAAGAGAAGCAAAAGTTATAGTAGTAGTAACAACTTGAAGGAGATTCTGGAGGAGTTCATGAGACAACAGATTCAGATAGAGACCCAGTGGATGGAAGCATTTGAAGCTCGAGAAAAAGAGAGAAGGATGAAGGAGATGGAGTGGAGACAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAGAGATGGAGAGAGAGAGAAGAAGAGAGAAGGATTAGGGAAGAAGCTAGGGCTGAAAGAAGAGACGCTTTAATCACTGCTCTTCTTAACAAGCTATGTAGTTAA 867 0.4764 MDHIQHRHHHLLHQHPQQQHHLPQPQPGITMNNVDVSSGGAVVVDRLPQWSVQETKEFLAIRAELDQNFMETKRNKQLWQLISNAMTDKGYLRSPEQCKCKWKNLVTRYKGCETAEPESVRQQFPFYNELQAIFTARMQRMLWAEAGGGGGGAKKKTAKAAINASSEDEEDDNEEISTDHHQGERSSRKKMKRSKSYSSSNNLKEILEEFMRQQIQIETQWMEAFEAREKERRMKEMEWRQAMEALENERMMMEQRWREREEERRIREEARAERRDALITALLNKLCS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1206 288 PANTHER FI21293P1 17 287 - -
Lele43g1206 288 MobiDBLite consensus disorder prediction 147 198 - -
Lele43g1206 288 Coils Coil 236 263 - -
Lele43g1206 288 Pfam Myb/SANT-like DNA-binding domain 49 133 IPR044822 -
Lele43g1206 288 MobiDBLite consensus disorder prediction 17 34 - -
Lele43g1206 288 MobiDBLite consensus disorder prediction 1 34 - -
Lele43g1206 288 CDD GT1 48 113 - -
Lele43g1206 288 Gene3D - 50 111 - -
Lele43g1206 288 SMART sant 46 108 IPR001005 -
Lele43g1206 288 FunFam Zinc finger and SCAN domain-containing 20 50 111 - -
Lele43g1206 288 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1206 Lele-ChrLele43 20404139 20406079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1206 45 286 Trihelix Transcription Factor Family AT5G01380 53.030 1.20e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele43g1206 Myb_DNA-bind_4 2.7e-20 CL0123