Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1185 ATGGCAGAGTTGCAGAAAAGTTACAAAGCTTATCTCCTAAGTGTGATTCTGGTCTTACTGTTATGGCTTGGCATCACAGCGAGACCTTCCATGGCGGCCACAAAAAATGTAACAGTAGGAATCATTCTTGATCTGGATTCAGAATTTGGTAAAATGGTGAACAACAACCTCCATTTCGCCGTCGAAAATTACTATTCCAATCATACCAATACAACCGCCAAGATCGAGCTTATAGTCAAGAATGTTTCTCAGAATGACTTCCTCAAACTGGAAATAGAAGCTTCTGATCTAATAAAGAAAGATAAAGTGCGTGCCATAATGGGGCCCCAGAATTCAGAGCAAGCAAGGTTTATAGTGAAACTTGGGGAGAAACACCAAGTAGCAGTTATCTGGTTTCCCATAACTGGTCCTTCTCTTTTGCCACCTCCTTCCCTATCCTCCATCTCCTCCGATGATCAATGCCTTAATTGCTATCAGTTCCGAGCTATAGCTGCCACTATTAAAGCTCTTGGGTGGCATTCAATCATCCCCATTTATGAAGACACTGAATATGGCAGTCACCTTCTTCCATGCCTCACCAATATCTTCAAAGAGAAGGGCATACGAATGGCTAACGTAATTGCCATTGATTTACATTCAAGAGGTTCTGAAATTAACGGCACTCTCGACAAGTTGAAAAACATGTCAACACATGTATTTCTTGTCCATATGAGCATGGATCTCGGAACAAAATTTATTTTTTCTGCAGAAGCAAAAGATATGATGGTTAAAGGATATGCTTGGATACTTACCCAAGACCTATCTACTTTGACAGATCCTCAATGTCTGAACTGGAGAAAATCTTCTTCTGACCAAAACATATATGTTCTGTCTCGGAAATCTTTGAAAGGATACATGCAAGGTGCACTGGGAGTGAGGCCCATGGATTTGATTCCTAAAAAAACACAATTCCGTAGGGAGAAAGAGAGGAATTTCTCTGATAGCTTCAGAAGAAGTCTAACTATGTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCACTGGAGAAGCCAGGCACAGACACTGGCCCAAAACTTGCTAGTGAAATTTGGGCCACTAATTTCAAAGGCAATTCAGGGATACCTTTTGATTTAAGAAAAGGACACCTAGGTCATCAATCGGAGTATGAAGTATACAATGTGATAGGAGAAAGAGAAAGGATCATCGGATCTTGGACCCCTAAAAAATTTGGAATTGTTCAAAATTATGGTAAAGTTGGTGCGACATCTGGTGCATACCTACTGGAGGATCCACTGTGGCCGGGTGACACATTGGAAAAACCACCAAAATTGAGCATCGGAGTCCCCAGAACAAATTTTTTCCGTGAATTTGTGAATGGATATGCTAAACCGCAGCCTGGTGGCTTTGCTATTAATGTGTTCTTACAAGCTGTCCATGCTTTGCCATTTCCGTTAAAAAGTTATCAGTTTATTCTCTTGAACGAAAGCAGAAGCAATACTACCTATGATGATATTCTCTGCCGCCAAATGAAAGAGGAGGCAAATTCATTTCCAATACTTGCTGCGTGTATGAAAATATTGCAGAACCTTGATGCTATAATTGGAGACATCACAACTGTGGCACATCGCACAGAATGTGTTGATTTCACGTTGCCGTATTTAGATTCAAGTGTAGCAATGGTGGTAAGGGTGAAGACCTCCACAAGTAAGTGGATCCTCTTGAAACCTTTCAACTGGACACTATGGTTAATTCTTGGTGGGATTTTTGTGGGTGCAACTATTATCACAATTATATTAGAAGGATACAAAACCAACAAAAGTAAGGAAACCAACGAATTTCGCTTCAACCCCTTCCTTGTCTACAAGACCGATGTTATGGAGATCAATAAGGCAAGCAAAGCTGCAGGATGGATGGTTATACTGACGTCATTCCTATTCATCTTAGTGGTTCAAGTTTACACAGCGAATTTAACTTCAATTTTAACGCAAGGAAAAATCAAAGGACCTTCATTTGAGGACGACAACGAGATTAAAAGTAGAAATCTGTGCGTGGGATATAGAAATGGGTCGTGGGTGAGAGAAATGCAGAGAAGGCCAAGAGATTATCTCTTATTTGTGAACTTATTATTATGCCTAATAATTACCCTAACTGAGTCTGCAACTGTAAGTATACCAGTAGGAGTGATCCTGGATTCGAATTCATCACTTGGTTCCATGGCTCTCAGCTGCATCAACATCGCACTCCAAGATTTCTATTCCACAAATGATTCCTACTCAACCAAACTCCAACTTCATTTCAGGGATTTTGGAAACGACCTCACCACTGCAGCTTCTGCAGCTTGGGATCTAATAAATAATGAAAAGGTGCATGCAATCGTGGGACCTCAAAACTTAGAGCAAGCAAGTTCTGTTGTTGAACTTGGTACCGTGTCTTATGTACCTGTGATTTGGTTTTCTTCATCTGGTCCTTCTCTTTTGCCACCTCGTTCCCCATTCTCCATCCACTCCAACTCCACCAGAAGCCATTGCTTTCAGTTCAGAGCTATAGCAGCCATTATAGAAGCTTATCATTGGCAGTCTGTGATCCCCATCCATGAAGAGACAGAATTCGGCAATGACCTAATTCCATGTTTCTCTTATGCCTTTCATGACATGGACACTCGAGTTCCTTACATAAGTTCCATTAGTCAAAAGTTCACGGAAGATGAAATCACTAAAGAGCTTAACAAGATAAAAGACAAGCAAACATATGTGTTTGTTGCCCACATGACCGTGGAGCTTTGGTCAAGACTATTGAAATATGCACAAAACGCTGGGCTGATGAATGAAGGATACGCTTGGATACTTACTCAAGGCCTATCTTCTGTGACAGATCCCGAAGCTAAAGATATAGAAGTGAAAGGCTACATGGAAGGTGCTTTGGGTGTTAGGCCATCATTGGTTGTTTCCGATATAAGTAAAAGTAAGCGCGATTCCTTAGCGACAACATTAATGTCTAAGTACGATAAAACTATGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCTTTGGCCTATGCGGTAGAGAATGCCGGCTTAGTCAGTTCTAATGAAAGCAGAGTTGATCTTCGCAATGAAACCGAATCAAAACTTCGGAGAGCAATTCTTGATACTGATTTCGAAGGCCTGTCAGGGAATTTCAGTTTGAGGGAAGGACAACTAGAACCATCGGAAGTTGAAGTATACAATAATGTGAAAGGTCAAGGAGAGAGTATCATTGGAAGTTGGAGCCCCGAAAGAGGACTTTTTCAAAATGGCAGAGTAGTTGGTGAACCGGCTGGTAAATACAATCTAAGCGACCCGACGTGGCCGGGTAACACAAAGGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAAAAACCCATTTTACTGATTTCGTTAATGTTTCTGGAGAAGGGGAGGATATATCAGTTATTGGTGGCTTTGCTGTTGATGTGTTTAAAAGAGTGGTTGATGTTTTGCCATTTCCTTTATCTTATGAGTTTGTGCCCCTGAACAACATTAATCCCTATGATGATCTTCTCTGCCAGATCAAGAATCTTGATATTATAATCGGAGACATAACAAGTATAGAAAGTCGCACAAATTGTGTTGACTTCACATTGCCGTATTTATCTTCAAGCGTGGCAATGGTGGCAAAGGTGAGATGTAGGGGAGGATTTGAGAAATCGCACGTCCAAATGGGTGGTGATAGTGGTCATGTTTCTGTTGACCATAGCAGTGCAAGTTTACACTGCAAATTTGACATCAATTTTATCAGAGAGGACTAA 3825 0.4118 MAELQKSYKAYLLSVILVLLLWLGITARPSMAATKNVTVGIILDLDSEFGKMVNNNLHFAVENYYSNHTNTTAKIELIVKNVSQNDFLKLEIEASDLIKKDKVRAIMGPQNSEQARFIVKLGEKHQVAVIWFPITGPSLLPPPSLSSISSDDQCLNCYQFRAIAATIKALGWHSIIPIYEDTEYGSHLLPCLTNIFKEKGIRMANVIAIDLHSRGSEINGTLDKLKNMSTHVFLVHMSMDLGTKFIFSAEAKDMMVKGYAWILTQDLSTLTDPQCLNWRKSSSDQNIYVLSRKSLKGYMQGALGVRPMDLIPKKTQFRREKERNFSDSFRRSLTMYGWWAYHTIEALAMALEKPGTDTGPKLASEIWATNFKGNSGIPFDLRKGHLGHQSEYEVYNVIGERERIIGSWTPKKFGIVQNYGKVGATSGAYLLEDPLWPGDTLEKPPKLSIGVPRTNFFREFVNGYAKPQPGGFAINVFLQAVHALPFPLKSYQFILLNESRSNTTYDDILCRQMKEEANSFPILAACMKILQNLDAIIGDITTVAHRTECVDFTLPYLDSSVAMVVRVKTSTSKWILLKPFNWTLWLILGGIFVGATIITIILEGYKTNKSKETNEFRFNPFLVYKTDVMEINKASKAAGWMVILTSFLFILVVQVYTANLTSILTQGKIKGPSFEDDNEIKSRNLCVGYRNGSWVREMQRRPRDYLLFVNLLLCLIITLTESATVSIPVGVILDSNSSLGSMALSCINIALQDFYSTNDSYSTKLQLHFRDFGNDLTTAASAAWDLINNEKVHAIVGPQNLEQASSVVELGTVSYVPVIWFSSSGPSLLPPRSPFSIHSNSTRSHCFQFRAIAAIIEAYHWQSVIPIHEETEFGNDLIPCFSYAFHDMDTRVPYISSISQKFTEDEITKELNKIKDKQTYVFVAHMTVELWSRLLKYAQNAGLMNEGYAWILTQGLSSVTDPEAKDIEVKGYMEGALGVRPSLVVSDISKSKRDSLATTLMSKYDKTMSLYGLWAYDTITALAYAVENAGLVSSNESRVDLRNETESKLRRAILDTDFEGLSGNFSLREGQLEPSEVEVYNNVKGQGESIIGSWSPERGLFQNGRVVGEPAGKYNLSDPTWPGNTKERPPKLKIGVPKTHFTDFVNVSGEGEDISVIGGFAVDVFKRVVDVLPFPLSYEFVPLNNINPYDDLLCQIKNLDIIIGDITSIESRTNCVDFTLPYLSSSVAMVAKVRCRGGFEKSHVQMGGDSGHVSVDHSSASLHCKFDINFIRED 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1185 1274 Gene3D - 573 695 - -
Lele43g1185 1274 Gene3D - 459 572 - -
Lele43g1185 1274 SUPERFAMILY Periplasmic binding protein-like I 29 438 IPR028082 -
Lele43g1185 1274 PANTHER OS06G0188250 PROTEIN 718 1082 - -
Lele43g1185 1274 Gene3D - 847 1018 - -
Lele43g1185 1274 Gene3D - 163 349 - -
Lele43g1185 1274 SUPERFAMILY Periplasmic binding protein-like II 1128 1233 - -
Lele43g1185 1274 Gene3D - 31 162 - -
Lele43g1185 1274 SUPERFAMILY Periplasmic binding protein-like II 441 590 - -
Lele43g1185 1274 Gene3D - 1128 1246 - -
Lele43g1185 1274 Pfam Receptor family ligand binding region 745 1081 IPR001828 -
Lele43g1185 1274 Pfam Receptor family ligand binding region 58 398 IPR001828 -
Lele43g1185 1274 SUPERFAMILY Periplasmic binding protein-like I 727 1123 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1185 Lele-ChrLele43 20204714 20213813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1185 36 695 Ion Channels AT2G24720 27.273 7.01e-66 239