Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1184 ATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTCTCTGTTCAGTGTGAGTCTCCTCTTACTGTTATGGTTTAGCATCACAGCAAGGTCTTCCGTGGCGGCCACACGAAAAGTAGCAGTAGGAGTCATTCTTGATCTGAATTCAGCACTTGGTAGAATGGTTAACAACAGCCTCGCCCTCGCCGTTGAAGATTACTATTCCGATCATAAGGATACAGCCACCAAGATCGAGCTTATAGTTCGGAATGTTTCTCAGAACGATGTTGTCGCAGCGGCAGAAGAAGCTTCTCATCTAATAAAGAAAGAAAAAGTGCTTGCCATATTGGGGCCCCAGAATTCGGAGCAAGCAAGGGAAATAGTGAAACTCGGTGAGAAATCCCAAGTAGCAGTTATTTGGTTTCCCATGACTGGTCCTTCTCTTTTGCCACCTCCTTCCCCATCCTCCGATCAAGGCCATAATTGCTATCAGTTCCGCGCCATAGCTGACACTACTCAAGCTCTTGGGTGGCAATCGATCGTCCCCATTTATGAACAGACTGAATATGGCAGTCAGCTTATTCCATGCCTCACCGATGTCTTCAAAGATATGGGCATACGAATGGCTAACGTCACTGCCATCGATACTACTTCAATTAACCACACTCTTGACGAGTTAAAGAACATGCGAACACATGTATTTCTTGTGCATATGAACGTGGATCTCGGAACAACATTTATTAGGTCTGCAGAAGGAAAAGAGATGATGGGGCAAGGATATGCATGGATACTTACCCAAGGCCTATCTTCTTTGACACGTCCTTTAGTTATGATTAAGAGAGCCTTGTCTCATAATGGATCTATTGATTTCTATTATGAATATGTTACTTTGAGAAGATTCATGCAAGGTGCATTAGGAGTGAGGCCAATAATGAATATTGGGAATACAACACTAGCGGGTAGGGAGATAGAGAAGAAGTTCTCTAATAGGTTCAACCGTCCCCTAACTACATATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCACTAGAGAAGTCAGGCACAGACAACAACGGCCTAACCCTTCGCAGGAAAATTCTGGCTACTAATTTCAAAGGCGTGTCAGGGTTAAATTTTGATTTAAGTAAAGGACAGCTACATCAATCGGAGCTTGAAATTTACAATGTGGTAGGAGACAGAGAAATGGTCATCGGATATTGGAGCCCTGAAACGGGACTTCTTCAAGATGATAGTAAAGGTGGTGAGACATCCGGTGAATACCAACTAAAGGATCCACGATGGGGGGGTGACACATTGGATAAACTCCCAAAGTCGAGAATTGGAATCCCAACAACAAATTATTTTCCTGAAGTTCTGAATGTATATAGTTATCGTAAAGTCCGGATTGATGGCTTTTCTATTGATGTGTTCTTGAAAGCTGTCGATGTTTTGCCATTTCCGTTTAATAATTATGAGTTTGTTCTATTGCCGAAGAACATGACCTATGATGATATTCTCTGCCGCCAAATGAAAGAGAAGGGTCTTGATGCTGTAATTGGAGACATAGCAATTGTGGCAAATCGCACTGAATGTGTTGACTTCACGCTGCCGTATTTAGATTCAAGTGTAACAATGGTGGTAAAGGTGAAGACCTCCACAAGCAAGCGGATCCTCTTCAAACCTTTCAAATGGTCATTATGGTTAATTCTTGGTGGGATTTTTGTGACTGCGACTATGATCATAATCATATTAGAAAGAAACAAAACCAACGAATTTCGCTTCAATCCCTTCCTTGTTTACAAGATCGATGTTACGGAGAAGTTTGCAAGCAGAGCTGCAGGATGGATGGTGATACTGACGTCATTCCTATTCATATTAGTGGTGCAAGTTTACACAGCGAATTTAACTTCAATTTTAACACAAGGACAAATGAAAAGGCCTTCATTTAAGGACAAAGACGAGATCATCAAAGGTAACAATGTGTCGGTGGGATATCGAAAAGGGTCGTGGGTAAGAGGGTTGCTGATTGAACAAATAAGAATCAAGGATGATCAGTTAAAGGCTTATACAAGTCACGAAGAATACGATGAAGCACTGTCAAAGGGAACCGAAAATGGAGGAGTGGATGCTATTTTTGATGAAATTCCTTATCTCACGCTCTTCCTCTCCAAATATAACTACCGCTTCACCATGACAGGAACAATCTACAAAAGTGGTGGATATGCCTTTGCATTCCCAAAGAAATCTGGCATGACCTCGCACTTCTCAGATGCAATCTTAAAAGTGACTCAAGATGTGGAGCCATATCGTGCCTTGATGGCCAAGAACTCCTTACCAACCTCCACTGAAGATTGGGAATTTGAAGATCAAAGTGATACAGAGATGACAAGTTTGAAAATAGCTTACTTTGGAGGCCTTTATCCTGTTCTATTATCCATTGTGGCTCTCTTTTTAGGCCTTTCCATTATAGATCCATTAGTGATTCAACGGTTTCGTCAGAAGCTTTACAGGTGA 2496 0.4195 MAELQKSFKASLFSVSLLLLLWFSITARSSVAATRKVAVGVILDLNSALGRMVNNSLALAVEDYYSDHKDTATKIELIVRNVSQNDVVAAAEEASHLIKKEKVLAILGPQNSEQAREIVKLGEKSQVAVIWFPMTGPSLLPPPSPSSDQGHNCYQFRAIADTTQALGWQSIVPIYEQTEYGSQLIPCLTDVFKDMGIRMANVTAIDTTSINHTLDELKNMRTHVFLVHMNVDLGTTFIRSAEGKEMMGQGYAWILTQGLSSLTRPLVMIKRALSHNGSIDFYYEYVTLRRFMQGALGVRPIMNIGNTTLAGREIEKKFSNRFNRPLTTYGWWAYHTIEALAMALEKSGTDNNGLTLRRKILATNFKGVSGLNFDLSKGQLHQSELEIYNVVGDREMVIGYWSPETGLLQDDSKGGETSGEYQLKDPRWGGDTLDKLPKSRIGIPTTNYFPEVLNVYSYRKVRIDGFSIDVFLKAVDVLPFPFNNYEFVLLPKNMTYDDILCRQMKEKGLDAVIGDIAIVANRTECVDFTLPYLDSSVTMVVKVKTSTSKRILFKPFKWSLWLILGGIFVTATMIIIILERNKTNEFRFNPFLVYKIDVTEKFASRAAGWMVILTSFLFILVVQVYTANLTSILTQGQMKRPSFKDKDEIIKGNNVSVGYRKGSWVRGLLIEQIRIKDDQLKAYTSHEEYDEALSKGTENGGVDAIFDEIPYLTLFLSKYNYRFTMTGTIYKSGGYAFAFPKKSGMTSHFSDAILKVTQDVEPYRALMAKNSLPTSTEDWEFEDQSDTEMTSLKIAYFGGLYPVLLSIVALFLGLSIIDPLVIQRFRQKLYR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1184 831 Pfam Receptor family ligand binding region 54 392 IPR001828 -
Lele43g1184 831 Gene3D - 552 663 - -
Lele43g1184 831 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 816 - -
Lele43g1184 831 SMART GluR_14 440 762 IPR001320 GO:0015276|GO:0016020
Lele43g1184 831 Pfam Bacterial extracellular solute-binding proteins, family 3 460 760 IPR001638 -
Lele43g1184 831 Gene3D - 153 352 - -
Lele43g1184 831 SUPERFAMILY Periplasmic binding protein-like I 32 407 IPR028082 -
Lele43g1184 831 SUPERFAMILY Periplasmic binding protein-like II 462 759 - -
Lele43g1184 831 Gene3D - 437 551 - -
Lele43g1184 831 Gene3D - 32 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1184 Lele-ChrLele43 20184628 20193642 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1184 34 761 Ion Channels AT2G29120 32.066 9.16e-109 354