Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1183 ATGCAGAAAAGGCAAAAAGAACCTCTCGTATTTGTGGGCTTATTATGCCTAATCACCCTAACTGAGTCTGCAACTGTAAGAAGAACACGATCCCCTGTAGCTATACCAGTAGGAGTGATTCTGGATTCGGATTCATCACTTGGTAACGTGGCTCTCATCTGCACCAACATCGCACTCCAAGATTTCTATTCCACACATCATTCGTATGCAACCAGGCTCCAACTTCATTTCAGGGATTCTGGAAATGACCTCCTCACCACAGATTCTGCAGCTTGGGACCTAATAATTAATGAAACGGTGCATGCAATCGTGGGACCTCAAAACTCAGAGCAAGCAAGGTTTGTTGTTGAACTTGGCAATAAGTATGATGTGCCTGTGATTTGGTTTTCTCCATCTGCTGGTCCTTCTCTGTTGCCACCTCGTTCCCCATTCTTCATCAACTCCAACTCCACCAGAAGCCATTGCCTTCAGTTCAAAGCCATAGCAGCCATTATCGAAGCTTATAATTGGCAGTCCGTGATTCCCATTTATGAAGAGCCTGAATTCGGCAATGACCTCATTCCATGTCTCACTTACGCTCTGCTAGACATGGACGCTCGAGTTCCTTACAAAAGTTTCATTAGTCAAAATTCCTCTGATTCTCAAATCACCCAAGAACTTAAAAAGATAAAACGCAAGCGAACATATGTGTTTCTTGTCCATATGACCTTGGATCTTGGGTCAAGACTTGTGGAACAAGCACAAAAGGAAGGGATGATGAGTGAAGGATATGCTTGGATACTTACACAAGGCCTATCTTCTGTGATGGATCCTGAACCTATAGATATAAAAGTGAAAGGCTTCATGGATGGTGCTTTGGGTGTGAAGCCATCATTGGTTGTTTCCGACAAAACTAAACTTGAGCGCGTTTCCTTAGCGAGATCCTTATTGAAGTACAATAAAACTCTTTCTCTTTATGGCTTGTGGGCTTATGACACTATCACGGCATTGGCGAAAGCTGTAGAGAATGCCAGCTTGGTCAATTCTAATGAAAGCAGAGTTGATCTTCGCGAAGCAATTAAGGATACTAATTTCCCAGGCCTGTCAGGGAATTTCAGTTTGAGGCAAGGACTACTACAACCATCACAAGAAGTTGTAGTATACAATATTGTGGACCAAAAAGAAAGGATCATTGGATATTGGAGCCCCGAAAGAGGACTTCATCAAAATCGCAGTGGAATTGGTGAACCAGCTAGGAAATTCAAACTAAGGGACCCCATATGGCCGGGTCACACAGTGAAGAGACCACCAAAGATGAAAATTGGGATCCCCAAAACGCATTTTACTGAATTTGTTGATGTTAGTGATATGCCACCTACTGGCTTTGCTGTTGATGTGTTTAAAAAAGTGGTTGATGTTTTGCCATTTCCTTTACCTTATGAGTTTGTGCCCCTGAACAACATTAATCCCTATGAGGATCTTCTCTGCCAGATCACAGACAAGAATGTTGATGTTATAATTGGAGACATAACAGTTGTAGAGAATCGCACAAAATGCATTGATTTCACAATGCCGTATTTAGATTCAAGCGTGGCGATGGGGATAAAGGTTGGGTACGACCCCAAAAGTGAGTGGATCCTCTTGAAACCTTTTGATCAGGATCTTTGGTTAATTCTTGGTGGGATTATAGTGGGTGCAACTGTTATTATAATTATATTGGAAAGAAAAGGAAAGGATGATGATGAGAGCAAATTCGAACACTTTGTCCGCAATCCGTTCCTTATTTACATGAGTGATGTTGAGGATTTGAAAAGTGGCAAGTCTAAATGGGTGGTGATAGTGGTCACATTTCTGTTGGGCATAGCAGTGCAAATTTACACTGCAAATTTAACATCAATTTTAACGGGAAGGACAATGGCAAAGCCTTCTCCATGGAAGGACTTGAAAGAGATTAAAAGGAACAATGTGTCAGTGGGATATCAAAGCAATTCCTGGGTGAAAGATCTTCTGATAAACCAAATAGGATTGAAGACGGATCATTTGAAACCTTTAGGAAGTCTTGAAGAGTACGAGAAAGCATTATCAAAGGGAGCCAAAAATGGAGGTGTTGATGTTATTGTTGATGAAACTCCTTATCTCAGGCTCTTGCTTTGGAAATGCCCTTCTTGCAAGATGACAGGACCAATCTACAAAGCTGGTGGATTTGCCTTTGCATTCCCAAAGAATTCTACCTTGGAGCAGGTTAACGGGAAGATGGCGGAGGAAACTGTGCAGGAAGGTGAGAATTTGAAGGAAGCTGTACTGGACCGAGCTAATAGAGGCCCATCAACGCAGGACCAGGTACATTTTATTATTGATAAGTTGGGCCAAGATTATATCAATGATATTACAATTGAGGAATCAGAAAAGTTCCATGAGCAGGGGTTTTACATACATGATGGATCATGTCATGATAAAGCCCAAAACGTGGTAGACAATATAAGAATTGAAGAAATGGATCCAGGAAACTTTGACATGGGTCCAACGCAAGAGAGAATAGAACCAATTATCAATGAAATAGGTATGAACAATGAGCCTGTAATGGAAGAGAATAGTGAAGGTGTAGTAGTGCCTGAAACGCAATTTCTTCAGGAAATTTAA 2619 0.4143 MQKRQKEPLVFVGLLCLITLTESATVRRTRSPVAIPVGVILDSDSSLGNVALICTNIALQDFYSTHHSYATRLQLHFRDSGNDLLTTDSAAWDLIINETVHAIVGPQNSEQARFVVELGNKYDVPVIWFSPSAGPSLLPPRSPFFINSNSTRSHCLQFKAIAAIIEAYNWQSVIPIYEEPEFGNDLIPCLTYALLDMDARVPYKSFISQNSSDSQITQELKKIKRKRTYVFLVHMTLDLGSRLVEQAQKEGMMSEGYAWILTQGLSSVMDPEPIDIKVKGFMDGALGVKPSLVVSDKTKLERVSLARSLLKYNKTLSLYGLWAYDTITALAKAVENASLVNSNESRVDLREAIKDTNFPGLSGNFSLRQGLLQPSQEVVVYNIVDQKERIIGYWSPERGLHQNRSGIGEPARKFKLRDPIWPGHTVKRPPKMKIGIPKTHFTEFVDVSDMPPTGFAVDVFKKVVDVLPFPLPYEFVPLNNINPYEDLLCQITDKNVDVIIGDITVVENRTKCIDFTMPYLDSSVAMGIKVGYDPKSEWILLKPFDQDLWLILGGIIVGATVIIIILERKGKDDDESKFEHFVRNPFLIYMSDVEDLKSGKSKWVVIVVTFLLGIAVQIYTANLTSILTGRTMAKPSPWKDLKEIKRNNVSVGYQSNSWVKDLLINQIGLKTDHLKPLGSLEEYEKALSKGAKNGGVDVIVDETPYLRLLLWKCPSCKMTGPIYKAGGFAFAFPKNSTLEQVNGKMAEETVQEGENLKEAVLDRANRGPSTQDQVHFIIDKLGQDYINDITIEESEKFHEQGFYIHDGSCHDKAQNVVDNIRIEEMDPGNFDMGPTQERIEPIINEIGMNNEPVMEENSEGVVVPETQFLQEI 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1183 872 Gene3D - 539 662 - -
Lele43g1183 872 Gene3D - 156 327 - -
Lele43g1183 872 Pfam Bacterial extracellular solute-binding proteins, family 3 444 738 IPR001638 -
Lele43g1183 872 Gene3D - 430 538 - -
Lele43g1183 872 SUPERFAMILY Periplasmic binding protein-like I 35 430 IPR028082 -
Lele43g1183 872 SMART GluR_14 433 804 IPR001320 GO:0015276|GO:0016020
Lele43g1183 872 Pfam Receptor family ligand binding region 56 378 IPR001828 -
Lele43g1183 872 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 759 - -
Lele43g1183 872 FunFam Glutamate receptor 153 322 - -
Lele43g1183 872 SUPERFAMILY Periplasmic binding protein-like II 426 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1183 Lele-ChrLele43 20173851 20179697 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1183 11 758 Ion Channels AT2G29120 34.340 2.10e-130 412