Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1182 ATGAGATCAATAATGGCAGAGTTGCAGAAAAGCTTCAAAGCTTGTCTCTTAAGTGAGAGTGTTCTTCTCTTAGTGATATTATGGCTTAGCATCACAGCAAGAACTTCCATGGCGGCCACACGAGTACCAGTAGGAGTGATTCTTGATCTGAATTCAACACTTGGCATAATGGTTAACAACACCCTCCACGTCGCCGTCGATGATTACTATTCCAATCGTAAGGATACTGCCACCAAGATCGACCTTATAGTCCGGAATGTTTCTCAGAAAGAAGTCGTCGCCGCTGCAGAACAAGTTATTTGGTTTCCCATAACTGGTCCTTCTCTTCTGCCACCTCCTTCCCCTTCCTCCATCTACTCCGATGATCAAGGCCTTAAATATTATTGCTATCAGTTCCAAGCCATAGCTGACACCATTAAAGCTCTTGGGTGGCAATCAGTCATTCCCATTTATGAAGAGACTGAATATGGCAGTCACCTTATTCCATGCCTCTCCAATGTCTTCAAAGAAATGGGCATTCGAATGGCTAACGTAACTGCCATGGATTCAGATTCATCAGAATATGTTATTAACGGCACTCTTGACAGCTTAAACAAGACGCGAGCACGTGTGTTTCTTGTCCATATGAGCATGGGTCTCGGAGCAAATTTCATTTTGGCTGCACAAAGAAAGGAGATGATGGGTGAAGGATATGCATGGATACTTACCCAAGAGCTATCTTCTTTGACAGGTCCTCTAGTTGTGATTAATAGAACGTTGTATCATAACGATGGATCAATTAGTTTCTTTGATGATTATGTTACTTTGAAAGGATACATGCAAGGTGCAATAGGAGTGAGGCCATTGGATTTGAGCTCGAGGAAAACAAAGGAACGTAGGGACATAGAGAGCAATTTCACCAAAAAGTTCAATAGTGTTCTGACTATCTATGGATGGTGGGCTTATCACACACTGGAAGCTTTGGCTATGGCGGTAGAGAAGGCGCCAGCAGGCAAAGACACTGGCCTAAAACTTGCCAGTGAAATTTGGGCTACTAATTTCACACGAGATTCAGGGATACATTTTGATTTAAGGCAAGGACAACTAAATCAATCGGAGCTTGAAGTATACAATGTGGTAGGAACAAGAGAGAGAAGCATCGGATATTGGAGCCCTACAAATGGACTTGATCAGAATAATAGTAAGGATGGTGGTGGTGTGAAATCTGGGGAATACCCACTAAAGGGTCCCCTGTGGCCGGGTGACACATTGGATAAACCACCAAAGTTGAGAATTGGAGTGCCAAGAACAACTTCTTTTCCTGAATTTGTCAATGTGGATAATTCTAGTAATCCGCTGTTTGATGGCTTTGCCATTACTGTGTTTTTAAAAGCTGCCAGTGTTTTGCCATTTCCGTTCAATAATTATGAGTTTGTTCCCTTGCCCTACGAAAGTGGAAGTCCCATGAACTACGATGATATTCTCTGCAGCCAAATGCAAGTCGAGGCAAATTCGAGTGTGGCAATGGTGGTAAAGATGAAGAATGCCTCAAGTACGGGGATCCTCTTCAAACCGTTCAAATGGTCACTATGATGGTATGGAGTTTGCAAGCAGAGCTGCAGGATGGATGGTGATACTGACGTCACTCTTATTCATCTTAGTGGTGCAAATTTACACGGCTAG 1662 0.4308 MRSIMAELQKSFKACLLSESVLLLVILWLSITARTSMAATRVPVGVILDLNSTLGIMVNNTLHVAVDDYYSNRKDTATKIDLIVRNVSQKEVVAAAEQVIWFPITGPSLLPPPSPSSIYSDDQGLKYYCYQFQAIADTIKALGWQSVIPIYEETEYGSHLIPCLSNVFKEMGIRMANVTAMDSDSSEYVINGTLDSLNKTRARVFLVHMSMGLGANFILAAQRKEMMGEGYAWILTQELSSLTGPLVVINRTLYHNDGSISFFDDYVTLKGYMQGAIGVRPLDLSSRKTKERRDIESNFTKKFNSVLTIYGWWAYHTLEALAMAVEKAPAGKDTGLKLASEIWATNFTRDSGIHFDLRQGQLNQSELEVYNVVGTRERSIGYWSPTNGLDQNNSKDGGGVKSGEYPLKGPLWPGDTLDKPPKLRIGVPRTTSFPEFVNVDNSSNPLFDGFAITVFLKAASVLPFPFNNYEFVPLPYESGSPMNYDDILCSQMQVEANSSVAMVVKMKNASSTGILFKPFKWSLXWYGVCKQSCRMDGDTDVTLIHLSGANLHG 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1182 553 MobiDBLite consensus disorder prediction 384 405 - -
Lele43g1182 553 Gene3D - 128 429 - -
Lele43g1182 553 MobiDBLite consensus disorder prediction 384 398 - -
Lele43g1182 553 PANTHER OS06G0188250 PROTEIN 273 374 - -
Lele43g1182 553 SUPERFAMILY Periplasmic binding protein-like I 40 384 IPR028082 -
Lele43g1182 553 Pfam Receptor family ligand binding region 129 374 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1182 Lele-ChrLele43 20163622 20166288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1182 16 511 Ion Channels AT5G11180 25.699 3.25e-45 169