Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1177 ATGTTTGTGGGCCTCTTCTTCTTATTATTATTATGCCTAATTACCCTAACTACAGAGTCTGCAACTGTAAGAGAAGGTGGAAGAAGAAGAAGAAGAAGAATCCCCTCTGTCTCCCCGGTAGATATACCAGTAGGAGTGATTCTGGATTTGGATTCATCACTGGGTGACATGGCTCTCAACTGCACCAACATCGCACTCCAAGATTTCTATTCCACTCATGCTAACTATTCAACCAAGCTCCAACTTCTTTTCAGGCATTCTGAAAACGATGTCCTCAAATCAGCTCTAGCAGCTTGGGATCTAATAAATAAAGAAAACGTGCATGCAATCCTGGGACCTCAAAACTCAGAGCAAGCCAGGTATGTTGTAGATCTCGGTAACGACACTGATGTTCCTGTACCTGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTGTTGCCACCTCGTTCCCGATTCTTCATCAACTCCAACTCCACCGGAAGCCATTGCCTTCAGTTCCAAGCCATAGCAGCCATTATCGAAGCTTATAATTGGCAGTCCGTGATTCCCATTTATGAAGAGCCTGAATTCGGCAATGACCTCATTCCATGTCTCACTTACGCCCTGCAAGACATGGACACTCGAGTGCCTTATATAAGTGCCATTCGTCAAAATTCCTCGGAGGATCAAATCAAAGCTGAGCTTAACAAGATCAAAGACCAGCGAACATATGTGCTTCTTGCCCATATGACAGTGGAGCTTTGGTCAAGACTTGTGGACTACGCTCAAATTGAAGAGATGATGGGTAAAGGATACGCTTGGATACTTACTCAAGGGCTGTCTTCTGTGATGAATCCCAAAGCTAAAGATATAATACAAGTGAAAGGACACATAAATGGTGCTTTGGGTGTCAGGCCAGTGGTTGTTTCCTACATAGATAAGCTCGTTTCCTTGGAGAAAAAATTGTCCAAGTACGATAAAAGTCTGTCCCTATATGGCTTGTGGGCTTATGACACTTTCACAGCATTGGCCATTGCCGTGGAGAAGGCTGGCTTAGTCAGTTCTACTTTCAGATATAGGAAAGTAACAGGCCCAAAACTTCGCAAAGCAATTCTGGATACTGATGTTGAAGGCCTGTCAGGGAATTTCAGTTTGAGGCAAGGACAACTGGAACCATTGGAATTTGTAGTATACAATGTGAAAGACCAGAGCGAAATTACCATTGGATATTGGAGCCCCGAAAGAGGATTTCATAATCTCAGTGAAGTTGATGAACCAGCAGAAGGGCGGGATATATCAGCTACTGGCTTTGCTATTGATGTGTTTAGCAAAGTGCTTGATGTTTTGCCGTTAAATTTATCGTATGAGTTTGTGCCCCTTTTCTTTTTCTCAGCATGCATGATATTGGGTATCAATGGTGGTAAAGGTGATGCCCGACTCCAAAAGTGGGTGGATCCTCTTCAGACCTTTTGA 1452 0.4353 MFVGLFFLLLLCLITLTTESATVREGGRRRRRRIPSVSPVDIPVGVILDLDSSLGDMALNCTNIALQDFYSTHANYSTKLQLLFRHSENDVLKSALAAWDLINKENVHAILGPQNSEQARYVVDLGNDTDVPVPVIWFSPSGPSLLPPRSRFFINSNSTGSHCLQFQAIAAIIEAYNWQSVIPIYEEPEFGNDLIPCLTYALQDMDTRVPYISAIRQNSSEDQIKAELNKIKDQRTYVLLAHMTVELWSRLVDYAQIEEMMGKGYAWILTQGLSSVMNPKAKDIIQVKGHINGALGVRPVVVSYIDKLVSLEKKLSKYDKSLSLYGLWAYDTFTALAIAVEKAGLVSSTFRYRKVTGPKLRKAILDTDVEGLSGNFSLRQGQLEPLEFVVYNVKDQSEITIGYWSPERGFHNLSEVDEPAEGRDISATGFAIDVFSKVLDVLPLNLSYEFVPLFFFSACMILGINGGKGDARLQKWVDPLQTF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1177 483 SUPERFAMILY Periplasmic binding protein-like I 41 411 IPR028082 -
Lele43g1177 483 PANTHER OS06G0188250 PROTEIN 39 389 - -
Lele43g1177 483 Gene3D - 164 337 - -
Lele43g1177 483 Pfam Receptor family ligand binding region 62 395 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1177 Lele-ChrLele43 20109343 20112200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1177 41 453 Ion Channels AT5G27100 31.224 1.79e-68 233