Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1172 ATGTCCGCTTCAGCCCCTCCCGTCCTCCCCATCTCCAATTCCCAGACCGCCGCTGCCACCGGTGGCGCCACCGCTGAATCTGGAGGACCCATTGCCACGCCTGCTTTCCGTGCCTTCATCGGCCACCTCTCCGATACCGTCCGTAATGGCCTCGCTCAGCGCCGTCCTTGGGGTGAACTCGTTGACCGTACGGCCTTTGCGAAACCCGAGAGCTTCTCTGAAGCCACCCTTCGGATCCGCAAGAACTACTCTTATTTTCGTGTCAATTATTATGCTATAGTTGCTCTGATCCTTGGTGTTTCTCTGCTTACCAATCCGTTCTCTCTTATTGTCCTCGTGGGCTTGCTCGCTTCTTGGATGTTTCTATATCTCTTCCGTCCCTCTGATCAGCCTTTGGTCATTCTTGGTCGCACTTTCTCTGATTTCGAGACCTTGGCGCTCCTGGGTGGCCTTACTGTGTTTGTGATCTTTCTTACCAGCGTTGGATCTGTTCTTGTTTCGGCTCTCATGGTGGGTGTGGCCATTGTCTGCGCTCACGGTGCCTTCAGGGTTCCCGAAGATCTCTTCTTGGATGAACAGGAGGTTTCTCAAACCACTGGGTTCCTGTCATTCATCCGTGGTGCTGCAGCCAATGCTACTGTCGCCTCCTCTGTACCTACGGTCACTGCACGACCTGGAAATGAAATAAACGGGTTTGTTGCTTTCTTCAATTTATTGCCGTTGGACCGCAGCAAGTTGTGTGATTGTTGTGCCTTAATGTTATTGGTAGAGACAAAAAATGCTTTTTGTTCAGATGAATCCGATTCTACGGAGTTGAACAAGTCTTTTACTGTTTGGTCTTTGAGTGTACGCGAGCTGAGAAGCAATAAACAGAGAGTGTGTCCTTTGAATTACCCATTGTTGTTTCCACCACTCTACAAAACCAAAAACACATATTCCTCCTGTATGGGAAACTATAATCGGTTTGCCGAAAAGTTTCCCACAAATGAAGGAAGAAGACGACCCATTTCTTGTTCCTTCGTCGTCTCCTTCATTCTTGTTCTTCAAATTCTGGCATTTACGTTTCAACCAGTCTCAGGAGGAGGAGGTCATTCGTGGGATGGTGTGATTGTTACGCAAGCTGATTACCAGGCCCTGAGAGCAATAAAGCAAGAATTCATCGATTCCAGAGGAGTTCTGAGGAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTGGGTGGGCAGGAATCAAGTGTGCGAAGGGACAGGTTATAGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTCGAATTTCCGAGAAAATTGGAACCCTTCAAGCTCTTAGGAAGCTGAGTCTACACGACAATGTACTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAATCTACCTCTTCAACAATAGGCTTTCAGGTTCTATCCCTCCTTCTATTGGCAGGATTAGCCCAATGCTTCAGTCTATTGATCTTAGCAATAATTCTCTCTCAGGTACTATCCCTCCAAGCTTAGCAAACTCTACTAGATTATATAGACTCAATTTGAGCTTTAACTCCTTTTCTGGGTCCATTCCTATAACTTTCACTATGGCTCCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCTTGGGGTAGTGAAATGGGAAAAAACCAAACTTACCAACTTCAAATCTTGACCCTTGATCACAATCTCATTTCTGGAACCATTCCTGTTTCTCTGAGTAAGATGGGTTCTCTCCAAGAGATTTCTCTGAGCCATAACCAGATTAAAGGGTCTATTCCAAGTGAGCTAGATGGGCTTTCAAGGCTTCAAACTCTTGATCTATCAAACAATGGCATTAATGGTAGCTTTCCAGATAATTTTGACCGGTTAAAAAGCCTTACTGTGCTTAACCTGAAGAATAATAAGCTGGAGGGTGAAATCCCATCAACAATTGGGAACATCTCAGTAATCAACCAGATTGATTTCTCTGATAATAAACTTGTGGGGGAGATTCCAGATTCAGTTACCAAACTTGCAAATTTGACCACTTTTAATGTTTCTTACAACAATCTATCTGGCCTCGTCCCATCCCTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCTGGGAATCTCCAACTCTGTGGGTATATGCCTTCAAAACCATGCCCTTCTTCTTCACCCCTATCTCAAAATCCTCCATCTCCATCGCCAAAACCTTCATTGAACCCACACCATCATAAACTAAGCACCAAGGACATAATCCTAATAGTTGCAGGGGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCTTTTTGCTTTGTTGTTTGATCAGGAAAAGAGCAGCATCTAAAGAAAAGAATGGGAATAGTGCCAAAACATCGACTGCTGCTAGTACTGCAAGAAGTGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGTGAAGCAGGAGGGAAGCTAGTTCACTTTGATGGGCCATTTGTTTTTACAGCTGATGATCTCTTGTGTGCTACTGCTGAGATTATGGGAAAAAGTTCTTATGGAACAGCGTACAAGGCAACATTAGAGGATGGAAACCAGGTTGCTGTGAAGAGGTTGAGGGAGAAGACAACCAAAGCACAGAAGGAATTTGAAACTGAGGTTGCTTCACTGGGCAAAATTAGACACCCAAATCTGTTGGCACTTAGAGCATACTACTTGGGACCAAAGGGAGAGAAGCTTCTTGTCTTTGATCACATGACCAAAGGAAGTCTAGCATCATTCCTCCATGCTAGGGCCCCTGAAATTGTCATAGAATGGCCAACAAGAATGAGAATATCCCTTGGAGTGACACGTGGCCTATGCTACCTACATACACAAGAGAACATAGTACATGGAAATCTCACCTCAAGCAATGTACTCTTGGATGAGCAGACAAATGCCCACATTACAGACTTTGGTCTCTCAAGACTAATGACCACATCAGCAAACAGCAACATCATAGCCACTGCAGGAAACCTCGGATACAATGCCCCAGAGCTGACAAAGACCAAGAAACCAAACACAAAAACTGATGTGTATAGCCTTGGAGTCATCATTTTGGAGCTCTTAACTGGAAAACCACCTGGTGAACCTACCAATGGTTTGGATTTGCCACAGTGGGTTGCTTCAATTGTGAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACCATAGGCGATGAACTTCTTAATACTCTGAAATTAGCTCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCAGCAGATTCTTCAGCAACTGGAGGAGATCAGACCTGAGTCTTCATTGGATGATGGAGCAAAAGTCCCAGAAACTACTGAGTAA 3399 0.4501 MSASAPPVLPISNSQTAAATGGATAESGGPIATPAFRAFIGHLSDTVRNGLAQRRPWGELVDRTAFAKPESFSEATLRIRKNYSYFRVNYYAIVALILGVSLLTNPFSLIVLVGLLASWMFLYLFRPSDQPLVILGRTFSDFETLALLGGLTVFVIFLTSVGSVLVSALMVGVAIVCAHGAFRVPEDLFLDEQEVSQTTGFLSFIRGAAANATVASSVPTVTARPGNEINGFVAFFNLLPLDRSKLCDCCALMLLVETKNAFCSDESDSTELNKSFTVWSLSVRELRSNKQRVCPLNYPLLFPPLYKTKNTYSSCMGNYNRFAEKFPTNEGRRRPISCSFVVSFILVLQILAFTFQPVSGGGGHSWDGVIVTQADYQALRAIKQEFIDSRGVLRSWNDSGIGACSGGWAGIKCAKGQVIAIQLPWRGLGGRISEKIGTLQALRKLSLHDNVLGGPVPWSLGFLPNLRGIYLFNNRLSGSIPPSIGRISPMLQSIDLSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPITFTMAPSLTILALQHNNLSGSIPDSWGSEMGKNQTYQLQILTLDHNLISGTIPVSLSKMGSLQEISLSHNQIKGSIPSELDGLSRLQTLDLSNNGINGSFPDNFDRLKSLTVLNLKNNKLEGEIPSTIGNISVINQIDFSDNKLVGEIPDSVTKLANLTTFNVSYNNLSGLVPSLLSKRFNSSSFAGNLQLCGYMPSKPCPSSSPLSQNPPSPSPKPSLNPHHHKLSTKDIILIVAGALLVILLLLCCFLLCCLIRKRAASKEKNGNSAKTSTAASTARSAGKGGEVESGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSSYGTAYKATLEDGNQVAVKRLREKTTKAQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDHMTKGSLASFLHARAPEIVIEWPTRMRISLGVTRGLCYLHTQENIVHGNLTSSNVLLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIRPESSLDDGAKVPETTE 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1172 1132 CDD STKc_IRAK 850 1115 - -
Lele43g1172 1132 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 560 735 - -
Lele43g1172 1132 Pfam PRA1 family protein 51 193 IPR004895 -
Lele43g1172 1132 Gene3D Ribonuclease Inhibitor 630 734 IPR032675 -
Lele43g1172 1132 PRINTS Leucine-rich repeat signature 491 504 - -
Lele43g1172 1132 PRINTS Leucine-rich repeat signature 614 627 - -
Lele43g1172 1132 SUPERFAMILY L domain-like 412 712 - -
Lele43g1172 1132 Gene3D Ribonuclease Inhibitor 372 533 IPR032675 -
Lele43g1172 1132 Gene3D Ribonuclease Inhibitor 534 629 IPR032675 -
Lele43g1172 1132 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 565 1115 - -
Lele43g1172 1132 MobiDBLite consensus disorder prediction 731 753 - -
Lele43g1172 1132 FunFam Leucine-rich repeat receptor-like protein kinase 830 920 - -
Lele43g1172 1132 MobiDBLite consensus disorder prediction 1116 1132 - -
Lele43g1172 1132 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 372 556 - -
Lele43g1172 1132 Pfam Leucine Rich Repeat 491 510 IPR001611 GO:0005515
Lele43g1172 1132 MobiDBLite consensus disorder prediction 734 749 - -
Lele43g1172 1132 Pfam Protein tyrosine and serine/threonine kinase 848 1112 IPR001245 GO:0004672|GO:0006468
Lele43g1172 1132 MobiDBLite consensus disorder prediction 796 810 - -
Lele43g1172 1132 Gene3D Transferase(Phosphotransferase) domain 1 922 1127 - -
Lele43g1172 1132 Pfam Leucine rich repeat N-terminal domain 374 413 IPR013210 -
Lele43g1172 1132 SUPERFAMILY Protein kinase-like (PK-like) 848 1116 IPR011009 -
Lele43g1172 1132 FunFam Pollen receptor-like kinase 1 921 1126 - -
Lele43g1172 1132 ProSiteProfiles Protein kinase domain profile. 844 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1172 1132 MobiDBLite consensus disorder prediction 795 820 - -
Lele43g1172 1132 SMART LRR_typ_2 463 487 IPR003591 -
Lele43g1172 1132 SMART LRR_typ_2 686 709 IPR003591 -
Lele43g1172 1132 SMART LRR_typ_2 590 613 IPR003591 -
Lele43g1172 1132 SMART LRR_typ_2 638 662 IPR003591 -
Lele43g1172 1132 SMART LRR_typ_2 614 637 IPR003591 -
Lele43g1172 1132 Pfam Leucine rich repeat 568 627 IPR001611 GO:0005515
Lele43g1172 1132 Gene3D Phosphorylase Kinase; domain 1 850 921 - -
Lele43g1172 1132 MobiDBLite consensus disorder prediction 1113 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1172 Lele-ChrLele43 20060014 20067755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1172 364 1117 Receptor kinase-like Gene Family AT3G51740 66.069 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele43g1172 PK_Tyr_Ser-Thr 1.7e-39 CL0016