Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1156 ATGTCGAAGGTTCCCGATTCACCGACCAAGACGGATTTCGAGTCTTCTCCGGCCGACCAGACGCCGGTGTCGCCTTTACCGGATTTAGAGAAACAAACACAGCCACAGGGCGGAGTCGGCGGGATATTAAGGCGATGGAAGAGGGATGATTTGTTGAAGAGAGGCTCGTTGGTTTTGAGAGGGATTGCCCTGGTTTCCTCTCTGATCAGTTTCATTGTCATGGCCTCCAATAAGCATGGCGATTGGAAAAATTTCGACAGATACGAGGAATATAGGTATGTTCTGGCAATATCGATTCTGTCGACACTGTACACTGGCGGTCAAGTGTTCCGGCAAGTTAAGGAAAACTCTACCGGGAAGAATTTTCTTCAGCCAAGAACAGCTTTGTTGTTGGAGTTCATCGGAGATCAGATAATGGCGTATTTGTTGATATCATCGGCATCTTCAGCAGTTCCATTGACAAACAGAATGAGGGAAGGATCTGACAATATATTCACAGACACTTCTGCTGCAGCCATCAGCTTCTCCTTCTTGGCCTTCTTTGCTGCAGCTGCTTCCTCCCTTCTTTCTGGCTACAAACTATCAACTCAATCCTATATCTGA 603 0.4693 MSKVPDSPTKTDFESSPADQTPVSPLPDLEKQTQPQGGVGGILRRWKRDDLLKRGSLVLRGIALVSSLISFIVMASNKHGDWKNFDRYEEYRYVLAISILSTLYTGGQVFRQVKENSTGKNFLQPRTALLLEFIGDQIMAYLLISSASSAVPLTNRMREGSDNIFTDTSAAAISFSFLAFFAAAASSLLSGYKLSTQSYI 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1156 200 MobiDBLite consensus disorder prediction 1 40 - -
Lele43g1156 200 PANTHER CASP-LIKE PROTEIN 4A4 26 195 - -
Lele43g1156 200 Pfam Casparian strip membrane protein domain 52 182 IPR006702 -
Lele43g1156 200 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1156 Lele-ChrLele43 19940054 19942053 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1156 43 19940054 19942053 Lele43g1156 43 19940054 19942053 ECH
Lele41g0206 41 1656464 1659287 Lele43g1156 43 19940054 19942053 hybridization
Lele42g0200 42 1648110 1650110 Lele43g1156 43 19940054 19942053 hybridization