Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1151 ATGCCGATAGCTAGATACCGTCTCAAGAACGAGCTCACTTTGGCCGATCCTCAGCTGTACAGAGCTGCCGATAAGGATGATCCCGAAACTCTCTTTGAAGCTATCGCCATGGCCGGACTTGTCGGCCTCTTGCGCCAGCTCGGCGACCTTTCTCAATTTGCTGCTGAGATATTTCATGGCCTGCATGAAGAAGTAATGGTCACTGCTGCAAGAGGTCAAGGTCTTATGGTTCGTGTTCAACAGCTTGAGGCTGAAGTTCCTTCACTTGAGAAGGCTTTTCTATCCCAAACTCATCATCTACAATCCTTCTCCAAGGGAGGGATTGGTTGGCATCCTAATCTTCAGTCTGAATACAATCTTATTAGTCGTGGAGACATGCCTCGATTTGTAATGGATTCTTATGAAGAGTGTCGTGGCCCTCCTCGACTGTTCCTTCTGGACAAGTTTGACGTTGCTGGGGCTGGGGCATGTTTGAAGCGTTATACGGATCCATCATTCTTTAAATTGGAGACAGCTTCCTCTGGACTGACAAAAGTTGAAGTCTACAGGGAAAAGAAAAATCATAAAATCAAGAAGAAAGGCACGCGAATGAGGAATGGTGAAACCCCTGAAGTTGCATCCTCACATACAAAACTGCATCAGTTGCTTCATGAGGAGCGTATTGAGAATGCTTGGGCTGATTCTGGACGTCTTGTGAAATTGAAGAATAGACAATTAAATGGCCCGGCAACTGAAGCAAAAGCTGGGAAAAGTTACATGAAAAAATTCCTGGAATCTCCTTCGCGAGATGATGACGAAGTGGTTCGGGAAAAATCAATCTCTCCGCCTCATGTGAGATTGGTGTCGGATGATACTAGTGAAGATGGGATTAAAATACTTGAAATCAGTACTGTTGGACCTGTAAAAACGTCCTTGGAAAATGAAAGATATTCATGGACTAATGAGGACGAAGCAATAACAAAACCTTCCTCAGAAATGCTCAGTGAGAAAAATTGCAATCTCATGAAGAAGAAGCATGAACAAGGCTCATCTCGTGCGTCAGACGAACAAAATGAAAGACAAAACTTCTTGTATGGGTACCATTCTGATGATTTGATTAGTGAGGTTGACCATCACTTGGATATGGATTATAAGTGTAGAGATAAGAACAGTTTCCTGCATATTCATAAGCTAAAAGATTCTGATGATAAAGAACATCGACAGCAAGATCGATTTTCGCATTCACTATCATTTGCAGACTCCTTAATGTCAGATGAAATTAGTTCATTCAAACGAGATATAAATGAAGCACGTGCTGATTCTCAATCAGGCAACTCCTTCACATCAGATGACAATAGTTCACTCAAGAGGATTAGAAATAAAGAATATGTCAAACGGCAAGCCCAGTTTTCAGATTTTCAAACCATTGGAAAATCTTCCACATCAGATGTAAATAGTACTTTTGACAAAGATATTCCTTGTTTCTCTTGCTCTGAGATTGAAGATACATCATCAAACAAGCTTACTCAAATTTTTGAGACAAGAAAAACGGATCGCGGTAAGTCTCTCATGCAGGATGGCACACATGATCGGGAAAAAGTGATTTCTGGTGCAGGAGATGTGCCCTCTGGTTCATATCCAATGAATTCAGGACGTAAATTGCTATATTCAGATCTTGCAGCCACTTCAATGATGAAAATGTCTAAAAGGGCTCAATCAAATGAAACACCGAGTATAGCAGATGAAGGCACAAAGCACCACACTGACTCTATAGATGCCATTCCTGATGCTTTCTTCTCCCAAATGAAAGTTCATGCTGATGCTACAGAATGTTCCGAAAAATATCCTTTGAACGAATTGGCTGATGGTGACCAATCTGTCAGTTGTAATGCTATATTAAGTATTTCAAATGATTTGGAATTTGCTTCTGAAGATGAATGCAGTAAATGCTCCCCGATCAAAGGATTGCAAGCAGAATCTCCGAACCAAAACTGTTCAGACATTTTGGTTTGTAGGGAGATTGGTACAGAAGAAAATCCAATTTTCGCATCCACAGAAGTAGACTTGCATTCTTCAAGTACTAACTTGATGCTGGACGACCAACCTTCAAATGCTGCATTTGGTACTGAGGCATCAGAAATCAACTCACAAGATGAATCCGACTCTGTGGGAGTTGAAGCTAAATGTTACGATGAGCGATTGAATTTTGAAGAGCAATCAGAAATGGAGCATACTGATGAAATGAGTGGATCCACTTGCAGAGTGGATGCAGATGAAGATGATAGTCTTCTTAAAGGTTCATCTTCTGGTGGTGACTATGGTGGTGGGGAGGATTATCATGTCACAGATGATGTGGCTTCTACTGAGCTTCAGCCAGAAGATCAATCGGCATCTACTGATGCTGCTGAAGATGATGTGAATATGGCTTCTTGTACAGCTTCCGGTATGATTTCTTCTGCACCAAGAAATCTTTCAGATTTACAAGAACCTATACCTAGAACATGTTCCCATGAGACGAAAATGGAATCCCATGAGGTTGAACCGATCAAGATTGCTGAAGTTGACTTTAATGCCGAAAAGATGGAGAATCAACAGGAACCATCTTTAGATTCCAATATAATATCTTCTCCAATGAGACCTTTTACAACTTTTGAGGAATCTCATTTTTCTTTTGCTGGTCCTCAAGAGGAACAGAGGGAAAGTGAGGCAGTTGATAGAGAATGCTCTACAAAACTAGAGGAACAGAAGGGTGTACACCAACTGAGCCTGAACAGATCAGTGCCCTGTGATAATTCAGAAATATGTAATATTCTTCAATGTTCATCTCCTAAGGAGCAAACTGAACACAGTTCTGTCAAGGATAAGATTCTCAAGTTTTCAAAGCTAGACTCTCAGGAACCAAAATTCATATCTCGTTTGCAGAGTAAACGTTTACGGAATTGTGAAGATGGTTTAGCATCTTCTTCATTGTCTAACCAGCTGGAGTCTGGAAATCATTCAGAGAAGTTCTTGCAATCACAAGATGATCAACGGGGTACAGGATTTCTGCTTGCATGTGTAGAAAAGTCTTCCTCAAAGAAACCTCAATCTGAACATATGCAAATATCGAATCACTTGGAAAAGGAAAGAAACTCTTATGCTGCCTCTAAATCTGTCCCTGAAAGTCAGGAACATGTCATGAACAAACCTCTTCTGGACCCCTTATCCGAGGCACCGAAAATCAATGTTGAGGAGATGCCACCCATGCCTCCTCTACCACCTATGCAATGGAGAACTAGTAAAGTTCAGCCTACTTCCCTCGCTTCACATAGAGAAGTCTCATTCCAACCAATGCAGCCAATTAAGAGTGAAGAGCAAGCTCAATATAGTTTACCAACTTCCGAGAGAGAAGCTTTGCGGTTTCAGAATCCTGTTTTACCTGATATGGCTGTGGAAAGTGATAAGCTCCAGAATACCTCGGGATTTTTCGCAGGTGGCCATCCTGTTGCAATTTCTATGCAACTGCCAATCGTGCTTAATGAAGTAAGAGGCAAATATAATTACCTAGTTTTGGACGGAAGCCAGACGCACAACCCATTCCTAGGTAACATTGTAGCCTCAGAGGGAGAAAGCGTACAAAATTCAAACACAAGCACACCAATTCCACCTGTTGAGCCTTCCATTTCTGTACAAGATCCTATCTCTCCACAGGAACTGTCTCAACCACCAAGCCAACCTAGTTTAGAAGTTAAAACACTTCAACAGGCTGCAAATAATCTGGAAGGGAAGCAAGAAGATACTTCTATTTCACCCATGTCTCCATCAAGCATAGAAAATGTGCAACCCAATCACAACCTGCTCTCTTCAGAAGGGAAGCAAGGAGATCATTCCAATTCATCCATGTCGCCACCAGGCATGGAAAATATGCAGCCTAATCACAACCTGCTGCATTCAGAAGGGAAGAAAGGAGATCCTTCAAATTCACCCATGTCACCACCAGGCATGGAAAATTTGCAGCCCAATCACAGCCTGCTGTATTCAGAAGGGAAGAAAGGAGATCCTTCAAATTCACCCATGTCACCACCAGGCATGGAAAATTTGCAGCCCAATCACAGCCTGCAGCGTTCAGAGAGTGCAATGGCTTCGACATTGGATAAGTCTGCTCTAGCATCAGATTTTGAGAGGGAAAGGCTAAATGGAAAGTCAAATGATAAGCTCCCTCGTCCACGGAGTCCTGTGATCGATGCAGTTGCTGCTCTTGACAGAAGCAAGCTGAGGAAGGTTGCTGAAAGGGTTAGGCCAAAGGTAGAAGAAAGAGATTCATTTCTAGAGCAGATAAGAACAAAGTCTTTCAACTTGAAGCCAGCTGCAACAACACGAAACCGCTATCATTATCAGGGGCCAAGAACAAACTTAAAGGTTGCCGCCATCTTGGAGAAAGCAAATGCAATTCGCCAGGCTCTAGCCTGGAGTGATGAAGATGACGATAAGGATAGTTGGAGTGATTCTTAA 4470 0.4217 MPIARYRLKNELTLADPQLYRAADKDDPETLFEAIAMAGLVGLLRQLGDLSQFAAEIFHGLHEEVMVTAARGQGLMVRVQQLEAEVPSLEKAFLSQTHHLQSFSKGGIGWHPNLQSEYNLISRGDMPRFVMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKLETASSGLTKVEVYREKKNHKIKKKGTRMRNGETPEVASSHTKLHQLLHEERIENAWADSGRLVKLKNRQLNGPATEAKAGKSYMKKFLESPSRDDDEVVREKSISPPHVRLVSDDTSEDGIKILEISTVGPVKTSLENERYSWTNEDEAITKPSSEMLSEKNCNLMKKKHEQGSSRASDEQNERQNFLYGYHSDDLISEVDHHLDMDYKCRDKNSFLHIHKLKDSDDKEHRQQDRFSHSLSFADSLMSDEISSFKRDINEARADSQSGNSFTSDDNSSLKRIRNKEYVKRQAQFSDFQTIGKSSTSDVNSTFDKDIPCFSCSEIEDTSSNKLTQIFETRKTDRGKSLMQDGTHDREKVISGAGDVPSGSYPMNSGRKLLYSDLAATSMMKMSKRAQSNETPSIADEGTKHHTDSIDAIPDAFFSQMKVHADATECSEKYPLNELADGDQSVSCNAILSISNDLEFASEDECSKCSPIKGLQAESPNQNCSDILVCREIGTEENPIFASTEVDLHSSSTNLMLDDQPSNAAFGTEASEINSQDESDSVGVEAKCYDERLNFEEQSEMEHTDEMSGSTCRVDADEDDSLLKGSSSGGDYGGGEDYHVTDDVASTELQPEDQSASTDAAEDDVNMASCTASGMISSAPRNLSDLQEPIPRTCSHETKMESHEVEPIKIAEVDFNAEKMENQQEPSLDSNIISSPMRPFTTFEESHFSFAGPQEEQRESEAVDRECSTKLEEQKGVHQLSLNRSVPCDNSEICNILQCSSPKEQTEHSSVKDKILKFSKLDSQEPKFISRLQSKRLRNCEDGLASSSLSNQLESGNHSEKFLQSQDDQRGTGFLLACVEKSSSKKPQSEHMQISNHLEKERNSYAASKSVPESQEHVMNKPLLDPLSEAPKINVEEMPPMPPLPPMQWRTSKVQPTSLASHREVSFQPMQPIKSEEQAQYSLPTSEREALRFQNPVLPDMAVESDKLQNTSGFFAGGHPVAISMQLPIVLNEVRGKYNYLVLDGSQTHNPFLGNIVASEGESVQNSNTSTPIPPVEPSISVQDPISPQELSQPPSQPSLEVKTLQQAANNLEGKQEDTSISPMSPSSIENVQPNHNLLSSEGKQGDHSNSSMSPPGMENMQPNHNLLHSEGKKGDPSNSPMSPPGMENLQPNHSLLYSEGKKGDPSNSPMSPPGMENLQPNHSLQRSESAMASTLDKSALASDFERERLNGKSNDKLPRPRSPVIDAVAALDRSKLRKVAERVRPKVEERDSFLEQIRTKSFNLKPAATTRNRYHYQGPRTNLKVAAILEKANAIRQALAWSDEDDDKDSWSDS 1489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1151 1489 MobiDBLite consensus disorder prediction 187 207 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1197 1301 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 781 803 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 981 1000 - -
Lele43g1151 1489 Gene3D - 1 90 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 731 803 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1375 1390 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1345 1371 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1197 1398 - -
Lele43g1151 1489 Gene3D - 1402 1488 - -
Lele43g1151 1489 Gene3D - 100 251 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 731 758 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1018 1040 - -
Lele43g1151 1489 PANTHER WASP-1 1 1488 IPR028288 GO:0005856|GO:0030036
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1015 1052 - -
Lele43g1151 1489 MobiDBLite consensus disorder prediction 1316 1330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1151 Lele-ChrLele43 19892322 19898778 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1151 43 19892322 19898778 Lele37g1385 37 22624776 22626608 CCT
Lele43g1151 43 19892322 19898778 Lele38g1260 38 23397903 23401980 CCT
Lele43g1151 43 19892322 19898778 Lele40g1202 40 21883268 21887771 CCT
Lele43g1151 43 19892322 19898778 Lele43g1151 43 19892322 19898778 ECH
Lele41g0211 41 1693507 1699962 Lele43g1151 43 19892322 19898778 hybridization
Lele42g0206 42 1689067 1695291 Lele43g1151 43 19892322 19898778 hybridization