Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1139 ATGGCTTCCAGGGGGAGAAAGAAAGCTTCTCTTCAACACAAGTTACAGCAGCTTCGACATATCACAAATTCTAGTGCTGTGAATAAAGCCTCAATTATTGTGGATGCGTCCAAATACATTGAAGAGTTGAAGCAAAAAGTGGAGGGACTCAACGCAGAACTTGGAAGTAGCAGCAGTACTGGTGAATCTTCATCCTCCTCACAAAATCAATTACCTAAGGTGACAGTGGAAACCCTAGAGAGGGGTTTTTTGATAAATGTGTTTTCAGAAAGGAATTGCCCAGGAATGCTCGTCTCAATACTCGAAGCCTTTGAAGTGCTTGGACTTGAAGTTCTTGATGCTAGGGTTTCTTGTGAAGATGCCTTTCAACTCGAAGCTGTGGGAGGAGAAAGTCAAGAGATCGATGAGAACATAGATGCACAAGTGGTGAAGCAGGCAGTGCTTCAAGCAATAAAGGACATGGAGTGA 468 0.4338 MASRGRKKASLQHKLQQLRHITNSSAVNKASIIVDASKYIEELKQKVEGLNAELGSSSSTGESSSSSQNQLPKVTVETLERGFLINVFSERNCPGMLVSILEAFEVLGLEVLDARVSCEDAFQLEAVGGESQEIDENIDAQVVKQAVLQAIKDME 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1139 155 Coils Coil 33 60 - -
Lele43g1139 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 152 - -
Lele43g1139 155 MobiDBLite consensus disorder prediction 53 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1139 Lele-ChrLele43 19745146 19746519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1139 11 149 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.822 1.38e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1139 43 19745146 19746519 Lele25g1107 25 7153415 7160410 ECH
Lele43g1139 43 19745146 19746519 Lele26g1107 26 7155072 7156282 ECH
Lele43g1139 43 19745146 19746519 Lele27g0971 27 17498787 17507618 ECH
Lele43g1139 43 19745146 19746519 Lele28g1100 28 7133272 7138483 ECH
Lele43g1139 43 19745146 19746519 Lele43g1139 43 19745146 19746519 ECH
Lele43g1139 43 19745146 19746519 Lele01g1015 01 5882328 5883424 ECH
Lele43g1139 43 19745146 19746519 Lele02g1030 02 6343401 6344516 ECH
Lele43g1139 43 19745146 19746519 Lele03g1016 03 5890967 5892075 ECH
Lele43g1139 43 19745146 19746519 Lele04g1019 04 6316093 6317161 ECH
Lele41g0225 41 1839189 1840569 Lele43g1139 43 19745146 19746519 hybridization
Lele42g0219 42 1839556 1841011 Lele43g1139 43 19745146 19746519 hybridization