Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1124 ATGGGGAATTATAGGTTTAGGTTATCAGATATGATCCCTAATGGTTGGTTTTACAAGCTCAGGTATATGGGAAAGAGGAAGAACAAGACATCATTGGACATGGAGAAGAAGAAGAAGGAATCTTTATCCTCATCGACTTCGACAACCTCAAAGACATCAAAACCAAAGCAACCCCACCAGAGCATTCCCAGAAAGTCTTACTACTTTACGAGGGAGCTTAATTATAATCAAACCGATAGAATCTACAATACTTCATCATCACCACCTTCCTCTAACCCCAAAGTTTCTGTTTCAGACACCAATTTCCCAGAAACACCCAGAAAATCCCCGTCCAAACAGAAGAGACCTAAGAGAAGAACCACGAGAACTTCTCTGAAGCAGCCCGTGTCTTCCTCAGTTTCTTCTGGCTGTCACTGCCGAACCACCCTCGAATCCCCTTGGACCAAGTCGGATTCCCCACCTGACAACTCATTGTCTCCGTTTGACAGCTATGCTGATTCAGAATTCCCAGTGCCAGAGTTCAGAACAGACCGTGTCCTTCCCACTGAATCGTCATTTGATGAAGATTGCAACAGCTGCAGGCTAGAGTTTCACGAAAACGACATCGTTATCGACATGGACAAGAATTCCATCGCAAGAAAACATGATAAGCTCGATGGCCTGGATTCATTCTCCGAGCTGGTGCTACCTCCGATCATGACCAAGCCAACGAAATTGAAGAAAGAAACCAAAGTAACCAAACCCAGAAACAGAGGACGAACATTCGAAGAACCCCAAGAACAGGGGAATCTGAAAGTCAAGATTTTGAATAGGGAACCGAGGACGAACCAGGTTCGGAGATTCTCCGTCAGCTCGCCGGGAGTGAAGATTCGGGTGAATTCCCCGAGAATAAGTGGCCGGAGGAGTCAGGGGTATAGTGGCAGGAAAAGTGTGTCTTCATCGTCGACGAGGAGGAGCTCCCGGAGAAGCCTCTCCGATAGCTTTGCGGTGGTGAAGGCGTCGTTAAACCCACAGAAAGACTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCAGAGCATCAAAGGACTTAGAAGATCTTCTTGCTTGTTATCTCTCTCTGAATTCAGATGAGTATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACCCATTAG 1185 0.4591 MGNYRFRLSDMIPNGWFYKLRYMGKRKNKTSLDMEKKKKESLSSSTSTTSKTSKPKQPHQSIPRKSYYFTRELNYNQTDRIYNTSSSPPSSNPKVSVSDTNFPETPRKSPSKQKRPKRRTTRTSLKQPVSSSVSSGCHCRTTLESPWTKSDSPPDNSLSPFDSYADSEFPVPEFRTDRVLPTESSFDEDCNSCRLEFHENDIVIDMDKNSIARKHDKLDGLDSFSELVLPPIMTKPTKLKKETKVTKPRNRGRTFEEPQEQGNLKVKILNREPRTNQVRRFSVSSPGVKIRVNSPRISGRRSQGYSGRKSVSSSSTRRSSRRSLSDSFAVVKASLNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDTH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1124 394 MobiDBLite consensus disorder prediction 70 107 - -
Lele43g1124 394 MobiDBLite consensus disorder prediction 123 163 - -
Lele43g1124 394 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 391 IPR038933 GO:0045892
Lele43g1124 394 MobiDBLite consensus disorder prediction 27 42 - -
Lele43g1124 394 MobiDBLite consensus disorder prediction 239 262 - -
Lele43g1124 394 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Lele43g1124 394 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 328 391 IPR006458 -
Lele43g1124 394 MobiDBLite consensus disorder prediction 239 260 - -
Lele43g1124 394 MobiDBLite consensus disorder prediction 290 320 - -
Lele43g1124 394 ProSiteProfiles OVATE domain profile. 330 389 IPR006458 -
Lele43g1124 394 Pfam Transcriptional repressor, ovate 334 390 IPR006458 -
Lele43g1124 394 MobiDBLite consensus disorder prediction 43 64 - -
Lele43g1124 394 MobiDBLite consensus disorder prediction 27 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1124 Lele-ChrLele43 19621180 19622364 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele43g1124 Ovate 2.3e-24 No_clan