LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele43g1122	ATGAGATTAGCAGGCATGGGGGTGGCTCAAATTCATTATGTGGAAACAGACCCATCTGGAAGATATGGACGATTGAGGGATGTACTGGGGAGAGGGGCGATGAAGATAGTGTACAGAGCATTTGATGAGGTGTTGGGAATAGAAGTGGCATGGAACCAAGTGAAGCTTGGAGATGTGTTTCATTCCCCAGATGAACTGCAACGCCTTTATTCAGAGGTTCATCTTCTCAAGAACCTTGATCATCCCTCTATCATGACCTTCCATGCTTCATGGATCGATGTCCAACACCGAACCTTCAACTTCATCACCGAGCTCTTCACCTCCGGCACCCTCCGAGAGTATAGGAAGAAGTACTGTAAAGTAGATATTCGGGCAGTGAAGAACTGGGCTCGTCAAGTCCTCAGTGGTTTGGAGTATTTGCACTGCCATGATCCTCCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTTGTGAATGGCCATCTGGGGCAGGTCAAGATCGGCGATTTAGGCCTCGCCGCCATCCTCCGTGGCTCTCAACATGCCCACAGTGTCATAGGTACACCTGAATTCATGGCTCCAGAACTGTATGAAGAAGAATACAATGAACTTGTTGATATATACTCCTTTGGGATGTGTATGATAGAGATGCTTACGTCTGAATTTCCTTACGGAGAGTGCTCAAACCCGGCACAAATATACAAGAAAGTCACTTCAGGGAAGCTACCAGATGCATTTTACCGAATCCAAGATTTGGAAGCTCAGAGATTCGTGGGAAAATGTTTGGCAAATGTGTCGAAGAGATTGCCGGCGAAGGAACTCTTGTTGGACCCGTTTTTAGCCATGGTCCAACTCGAATCACCACCACCCTGCCTGCCATCACCAAAGATTCAAACTCATTACAAGTCCAATTCCAATTCAGTAGTTGCCAGCAAGGTGCATTCTTCCATGGCGGATCAAACCAATAGCACAAACATGACAATAACAGGGACAATGAATGAAGAAGATGACACAGTTTTCCTTAAAGTACAAATATCAGACAAAAATGGGCATGTTAGGAACATATACTTCCCCTTTGACACCATAAATGACACTGCAATGGACGTTGCCATTGAGATGGTTAGGGAATTGGAAATAAACGACTTGGAGCCGTTGGAGATTGCTCAAATGATAGAGGAAGAGATATTAGCTCTGGTTCCAACTTGGAAAGATTGGGGCACCACTTCTCAGTTTCCACGTCAACACAGCTTTAGATATGAAGAAGAAGAAGATGATATGAGCAACCACCATCCTTTTTTCTCATCTTCTACTTCACGATCCTCCTCTCATGGTTCTCTCCCAATGCTCAGCTTCTCTAGCAAGACCCTCTTTGGTGGGAACAACAACCATTTCTCACTTCCTCAGGATTGGCTTCAAGATAATAATGGCTTTCGCGACGACACAAGCTCAGAAAGCTCTATGAATTCCTTCAAATATGCTAACACGAATCACTGCGAGGCGAGCATGGAAGATAATGAGCATGATGCAAATTACAAGTGCTCAAGATTCTGTCCTGCACAAGAGATGGAAGACAATTACAGTAATAAGCAGATGATGATCAGCTATCGAAGAACAACATATTGCTGTCGGAGGTGCGGTGATCATCGGCCGGCGGCGAGAATGACGAGGATGCGGTCATATGTGGATGTGAGGAGCCAGCAGTTGCAGAGATCGTTAATGGAGGAGATCCATAAGAAAAGGATGTCCAAGACGGTAGGGGCCATTGAGAACATTGGCTTTCAGGATCCAACCGCCACACGGAGGTCTGGCTCTTAA	1818	0.4538	MRLAGMGVAQIHYVETDPSGRYGRLRDVLGRGAMKIVYRAFDEVLGIEVAWNQVKLGDVFHSPDELQRLYSEVHLLKNLDHPSIMTFHASWIDVQHRTFNFITELFTSGTLREYRKKYCKVDIRAVKNWARQVLSGLEYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTSEFPYGECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVGKCLANVSKRLPAKELLLDPFLAMVQLESPPPCLPSPKIQTHYKSNSNSVVASKVHSSMADQTNSTNMTITGTMNEEDDTVFLKVQISDKNGHVRNIYFPFDTINDTAMDVAIEMVRELEINDLEPLEIAQMIEEEILALVPTWKDWGTTSQFPRQHSFRYEEEEDDMSNHHPFFSSSTSRSSSHGSLPMLSFSSKTLFGGNNNHFSLPQDWLQDNNGFRDDTSSESSMNSFKYANTNHCEASMEDNEHDANYKCSRFCPAQEMEDNYSNKQMMISYRRTTYCCRRCGDHRPAARMTRMRSYVDVRSQQLQRSLMEEIHKKRMSKTVGAIENIGFQDPTATRRSGS	605

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele43g1122	605	Gene3D	Phosphorylase Kinase; domain 1	9	104	-	-
	Lele43g1122	605	FunFam	Probable serine/threonine-protein kinase WNK1	8	104	-	-
	Lele43g1122	605	MobiDBLite	consensus disorder prediction	420	442	-	-
	Lele43g1122	605	Gene3D	Transferase(Phosphotransferase) domain 1	106	285	-	-
	Lele43g1122	605	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	12	549	-	-
	Lele43g1122	605	CDD	STKc_WNK	21	281	-	-
	Lele43g1122	605	ProSiteProfiles	Protein kinase domain profile.	23	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g1122	605	Pfam	Protein kinase domain	27	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g1122	605	SMART	serkin_6	23	281	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele43g1122	605	SUPERFAMILY	Protein kinase-like (PK-like)	25	327	IPR011009	-
	Lele43g1122	605	FunFam	probable serine/threonine-protein kinase WNK9	106	286	-	-
	Lele43g1122	605	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele43g1122	Lele-ChrLele43	19601189	19606193	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele43g1122	1	426	MAP Kinase Kinase Kinase	AT3G51630	67.840	0.0	600

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Lele43g1122		Pkinase	1.3e-45	CL0016