Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1115 ATGTTATCCCGAAAGAGCAATCAAACCGCTTTTCTTCTCCGAATCATAACCACAATTTTCGATTTCACCATTTCCTCTCTGGCTTTCGATTCACCCCCGACTTCAGCGACCTTCTACATCAAAGAAGTGGATCGTTCTACACAATTGCTGAGATCTGCGTGCAGGATGAGGTGCTTCTCTGTCTTGAAAAGTAAGAAGAAAAAGTCTGAACAAATCATCCCTATAAAACATGTCAATCATAAAGAGCATGGAGTAGCAACCATATTGCCTGAACCTCGAACACATACTAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACAAGAGTGAAAACCATTCAACCTGTTAATAAAATCATGAAAAATAGAATACGGGCATTATCTGCTCCTTCAACTCTTGATGCAGCAGAGCAAGATGCTTTGGCGTCAGTTGAGTATGAGGAACAAGAAGAGTCCAAATACCGAGCTGGATTGATGAAGGAGCAGCGTGTATCCACTTCACAACCCTTACCTCTCCCATCTCCTCAGGTTGGTGGTGCATTGAAGGCTACCAGTAGCTTTAAGTTAGGGACAGCTACTGGTCCTCTACATGCTTCTGGTCCTATATATGCTTCTGGACCTTTGCCACTGCCACCAACTGGTTCCCTACGGAACTTCCCATTTGAGGAAATTTCTGCTGCTTGCCACAATTTCTCTTCAGACCGATTCATGTCGGAAAGTCTTTCTTCTACCATGTATAAAGCTTCCTTTGGTGATGATGCTTCTAGTTCTAGTTCAAAAACTTTTGAAGCCACTATCACTCGCCTTCACCCTTCTACTCAGGCCTTGAAGGAGTTCATAAATGAGGTTAACATTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGCTAGGTTACCATGCTCGTGAGGGTTCAGAACAGAGAATGTTAATTTATGAAAGGCTCTTCCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGCCCACCACTCGATTGGAATACAAGAATGAAAATTTCTTTGTGTGCTGCCCAAGGTCTTACTTTCTTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAATGAGTTTTCTACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCTGAAGAAGAGATTCCAAGCAGTTCACCTGCTGTGGGAAACCTATCAGTGGAGACACTGGAAAAACGATTGCTAACTCCAAAGAGCAATGTTTGGAGCTTTGGCATTTTTCTTCTAGAACTACTGACTGGAAGAAAGAATCTGGATAGTCGTCACCCCAAGGAAGAGAGGAATTTAGTTAAGTGGAGTTGGCCCTTCCTAGCCGATGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGGTTTCCTTCCAAAGGAGCGAGGACAATAGCTGATATTGCACTAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAATCGTTGTTGAGCATCTGAAAATGGTACAGGATATGAAGTACTCTCTTCGGTTTCCTCTGCAAGAGCCTTCTGCAATTTCTGGAAAACAGATGTCAAGATCACCGAGTCTTAATGGCATCATCTGTCCCCAACCTAGAACGAGTTTCTCTCCATCACCACCACCACTGCCTTCAGGAACACAACCATCTGGTTCCCCTCCAAGATGGTCTGGTGGGCCCAACTTGCTTCCCTTCCGAGGGTGTTCCTCCATGCTTTCTTTGGATGAACTTGATCGGCAGTTAAGCCAGAAGTCGTCTTCCTCGGCGTCTAGGAGGGCTGGTGTTGTAGGATATTGA 1842 0.4452 MLSRKSNQTAFLLRIITTIFDFTISSLAFDSPPTSATFYIKEVDRSTQLLRSACRMRCFSVLKSKKKKSEQIIPIKHVNHKEHGVATILPEPRTHTRSLQSAPPSFKTRVKTIQPVNKIMKNRIRALSAPSTLDAAEQDALASVEYEEQEESKYRAGLMKEQRVSTSQPLPLPSPQVGGALKATSSFKLGTATGPLHASGPIYASGPLPLPPTGSLRNFPFEEISAACHNFSSDRFMSESLSSTMYKASFGDDASSSSSKTFEATITRLHPSTQALKEFINEVNIIASLQHPNLCKLLGYHAREGSEQRMLIYERLFHGSLDRLLYGRSDGPPLDWNTRMKISLCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSSSPAVGNLSVETLEKRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKGARTIADIALRCLQKEPSERPTMRIVVEHLKMVQDMKYSLRFPLQEPSAISGKQMSRSPSLNGIICPQPRTSFSPSPPPLPSGTQPSGSPPRWSGGPNLLPFRGCSSMLSLDELDRQLSQKSSSSASRRAGVVGY 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1115 613 PANTHER OS01G0588500 PROTEIN-RELATED 153 512 - -
Lele43g1115 613 MobiDBLite consensus disorder prediction 549 564 - -
Lele43g1115 613 SUPERFAMILY Protein kinase-like (PK-like) 210 521 IPR011009 -
Lele43g1115 613 MobiDBLite consensus disorder prediction 527 548 - -
Lele43g1115 613 Pfam Protein tyrosine and serine/threonine kinase 263 508 IPR001245 GO:0004672|GO:0006468
Lele43g1115 613 Gene3D Phosphorylase Kinase; domain 1 212 314 - -
Lele43g1115 613 ProSiteProfiles Protein kinase domain profile. 231 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1115 613 MobiDBLite consensus disorder prediction 527 579 - -
Lele43g1115 613 MobiDBLite consensus disorder prediction 158 177 - -
Lele43g1115 613 Gene3D Transferase(Phosphotransferase) domain 1 317 520 - -
Lele43g1115 613 MobiDBLite consensus disorder prediction 594 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1115 Lele-ChrLele43 19531685 19536341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1115 210 512 Receptor kinase-like Gene Family AT4G02010 37.338 2.69e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele43g1115 PK_Tyr_Ser-Thr 3.7e-23 CL0016