Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1114 ATGCACACGCCTCCTTTCTTTCTGTTCCTCTGCTCTTCATTCGCCTCTTCCAGCTTTTCTGGCCACCCTAGATTCATATTACTTCCCTTTTCCCCTTCCTTTTCTGATCTGATTCTTCCTTATCGTCCACTTCCTGAATGTGAATCTGCGAGTTACAGTGCTGCTGATGCCAGCTTAAGTCACATTCTTACTTTGTATTTTTTTTGCCTTTCTAGCTCTACTTATGAGCAATCAACATTTTGCTATGCGTTCCACTCAAAAGATTCTGGTTGGAGGGAGTGTTCTTCATGTGGCAAGCGCCTTCATTGTGGATGCATTGCTTCTCAAAATTTGCTTGAGCTGCTAGACACTGGTGGTGTAAGCTGCATAAATTGTAGTTCAACTATGGAAAAGCTTGATGGATCTGGTACATCAAGAGCTGAAATTGAAAGTGAACTACAATGCTCATTGGTTTCTAACCAATTAAAAGGAAGCAGTGTTGAGAATGTGAGAGGGGTGCGAGTAGGGGATTATGCAGAGAATGATGGGCCTAGGAGTTGGCTCCAACCTCATAATGGTCCTTCAAATGGGCCTTCTATGAGATTAAAACAAGAAGTTATGCCTTTTATGGGGGAACTTGGAAGCACTCCGATATCACAATTTCATCCAGAGTCTAATGGGTCATCTAAGGCTGTCAAAGTTGACAACTGCAAGACAGATGTAGAAATGAGAGATATGTATGAATCGTTTGCTCAAACAAATTTAAGTATGACTCTTGGCGCACCTTTAGGGAATTCAAACTCCTCTCGTAATGATGTTTTTTATGAGAGGGAGAATAGTAAGACATCATCTTCAACATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCTAGGTCAACCCTCACCACAAGTTTGGAGGCAAATGCAGGGATGGTATCTCAAATTCGTGTAGCCAGGCCACCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGATTCAAATTCAATCATTGTGCCATTGTTTGAAAAGACGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAATTAGAACTGAATGAGAAAGTTATTTTGCAGACATATTTTCCTCCTATCTCTCAGCCAGAGGGCCTTCCCCTACGAATCCAAGATGTGAAAGGGAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACTCCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACTGTGACATTTAGTCGTATGGACCCTGAGGGAAAACTTATAATGGGGTTTCGGAAGGCTTCAAATTCTGCTGCTGTACAGGAATCTCATCCGTCTAATATTCCCAATGGCAATCGTTCAAGTGAAACTTCCTATCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCCGGCCTTCTTCAGTCATTAAAAGGAAGTTCAGAACCCCACCTAAATGCGCTATCTAAAAAATGGAATTCAGCTTGTGGGGACATGAATAGGCATAATATTGAGATGCCTGAAGGAAGGAAAAGAGAAGGATTGCTTATGCCACCATCGCTGGTTCCGGAGAACAAAAAGACTCGTAATATTGGGCCAAAAAGCAAGAGACTGCTTATTGACAGCCAGGATGCACTGGAGCTGAAGCTAACCTGGGAAGATGCTCAGGATTTGCTGCGTCCACCACCAGCTGTTAAGCCGAGCATTGTCATGATTGAAGATCATGAACCTCCTATCTTTGGGAAGAGAAGTATATTTGTAGCCCGGTCAACTGGGAGTTCATGTTCTGCCCACAGTGAGCTCACACCGAGGGAACTTGATAATCTTCTGAGATTAGACAAGGAATTCAAGAATCAAAGAATGGCGGCTAGCCACAGGCTGTCCCTGGAGCAGCAGGAATCTTCTGGACTGGATGCTTTGGCTAATGCTGCAATACTTGGAGACGATGCAGGTGACTCTAGCAGGACACCTGTTGCTACCACTACAAAACACCCTCGGCATAGACCCGGCTGCTCCTGCATTGTCTGCATCCAGCCACCCAGTGGAAAGGGAAAACACAAACCTACATGCACTTGCAATGTATGCATGACAGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAACGTGAAGCTGAGATTGCTCAGAGAAATCAGCAGTCATGTGGGCCTAGGGATGAATCAGAAGTAGAAAGCACTTCTAGAAACTTAACTCCAGCTGATGGTTCTGAGACTGAAGCAACTCAAGCAAGGGTACCAAATGAGTTGGACTCAAGAAGTCAAACTGATGTGGCCGAAACTAGCAAGGGGCAGTTAGACTTGAACTGTGATCCCGATCGAAATGACACGCAAGGTCGCTCAAACAGTGTCAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTTTGGAGACATATCTGAAGCAAAATTGTCGTACTAGCTTGGTATCAGAGCAACAAGAAGCAAATTCACCTTCCAATGTGCAGGCGCAGGCCCCAAACAACGAGGGCGAAGGAGGACACGACGAGGATTGTTGCAATGCTTCTGATGTTAAGGAGCAAGAAAGCAGTCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAACAATCCCCCTTCTTGA 2736 0.4474 MHTPPFFLFLCSSFASSSFSGHPRFILLPFSPSFSDLILPYRPLPECESASYSAADASLSHILTLYFFCLSSSTYEQSTFCYAFHSKDSGWRECSSCGKRLHCGCIASQNLLELLDTGGVSCINCSSTMEKLDGSGTSRAEIESELQCSLVSNQLKGSSVENVRGVRVGDYAENDGPRSWLQPHNGPSNGPSMRLKQEVMPFMGELGSTPISQFHPESNGSSKAVKVDNCKTDVEMRDMYESFAQTNLSMTLGAPLGNSNSSRNDVFYERENSKTSSSTLPGPRSRHLLPKPPRSTLTTSLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKTLSASDAGRIGRLVLPKACAELELNEKVILQTYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKASNSAAVQESHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSEPHLNALSKKWNSACGDMNRHNIEMPEGRKREGLLMPPSLVPENKKTRNIGPKSKRLLIDSQDALELKLTWEDAQDLLRPPPAVKPSIVMIEDHEPPIFGKRSIFVARSTGSSCSAHSELTPRELDNLLRLDKEFKNQRMAASHRLSLEQQESSGLDALANAAILGDDAGDSSRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQSCGPRDESEVESTSRNLTPADGSETEATQARVPNELDSRSQTDVAETSKGQLDLNCDPDRNDTQGRSNSVSMMSLLQEASLPLETYLKQNCRTSLVSEQQEANSPSNVQAQAPNNEGEGGHDEDCCNASDVKEQESSHEENSGQDKSENNPPS 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1114 911 MobiDBLite consensus disorder prediction 853 872 - -
Lele43g1114 911 MobiDBLite consensus disorder prediction 269 283 - -
Lele43g1114 911 MobiDBLite consensus disorder prediction 853 911 - -
Lele43g1114 911 MobiDBLite consensus disorder prediction 752 807 - -
Lele43g1114 911 SUPERFAMILY DNA-binding pseudobarrel domain 352 463 IPR015300 -
Lele43g1114 911 MobiDBLite consensus disorder prediction 875 903 - -
Lele43g1114 911 FunFam B3 domain-containing transcription repressor VAL1 332 469 - -
Lele43g1114 911 Pfam B3 DNA binding domain 354 463 IPR003340 GO:0003677
Lele43g1114 911 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 71 861 - -
Lele43g1114 911 SMART B3_2 354 465 IPR003340 GO:0003677
Lele43g1114 911 CDD B3_DNA 352 463 IPR003340 GO:0003677
Lele43g1114 911 ProSiteProfiles B3 DNA-binding domain profile. 354 465 IPR003340 GO:0003677
Lele43g1114 911 MobiDBLite consensus disorder prediction 738 825 - -
Lele43g1114 911 MobiDBLite consensus disorder prediction 269 297 - -
Lele43g1114 911 Gene3D - 332 469 IPR015300 -
Lele43g1114 911 MobiDBLite consensus disorder prediction 679 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1114 Lele-ChrLele43 19524313 19530667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1114 75 880 B3 DNA Binding Superfamily AT4G32010 45.169 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele43g1114 B3 1.9e-13 CL0405