Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1101 ATGAGTTCTGATAAACCACTGCTTCCAGAATCAGATTGCTCTCAGGGGATTCATCGCTGTTCACGTAAATCAGGATCTTTCAGTCGCTATGTCTCCTTCCCATCTATCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACGTAGACGTTGTATCTGCTGGAGACTCTAGTTTTCATAGTACACTTGAACATTGCACTTTTTTGACAGAGAAGGACTCTCAATCAGTTGAATCTGAGTTTTGCCAGCAGCTACCTTTGGAATGCTCCACTCGAGAGAGGAGGTGCCTGACATCGTGGGGTGCAATGGAACAACATGATATGAATAGCAATACCGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAGTCACAGAGAATTTATCACAGAAGTGTGCAATTTGAAGATAACCTCGTACATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAATATGAGTTCACGGGGAATGAGATCCGAACTAGTAGATACACAATTATCACCTTCCTGCCTAAGAATCTTTTCATTCAATTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCTCTAAATCAGCTCCCTCCACTAGCTGTATTTGGTAGGACTGTGTCTCTTTTCCCCCTCTTGTTTGTTCTTTGTGTCACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCAGACCGCAATGAGAACAACCGAGTGTCTCTGGTGCTTCAATCTGGTGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGTGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCCGTTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTACATTCAGACAATGAACTTGGATGGGGAATCAAATTTAAAGACAAGGTATGCTCGGCAGGAAATGGCTTCAGCAGTATCACCAGATTGTTGTGCTGTTTCTGGGATCATTAGATGTGAGCAACCGAACAGGAATATTTATGAATTCACAGCCAACATGGAGTGCAATGGGCATAGATTTTCCCTTAGCCAAACAAATATTGTTCTGCGTGGTTGCCAACTGAAGAACACAGATTGGATAATCGGTGTTGTGGTTTATGCAGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGTATATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCCGTTGGGATGGGTCTTTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAGGGGCTCTGATAATGGAAAAAGATACAGATATTACGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACTATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGATGGGGATATGTATGATGCCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGATGATTTGGGTCAAATACGTTATGTATTTTCAGACAAGACAGGAACGCTTACAGAAAATAAGATGGAATTTCGAAAAGCTAGTATACATGGAAGGAATTATGGGAGTTCATTACTTATGGGCGATAATACAATAGTAGCAGAAGCAGTTAGTGGCAGAGGGAGATGGAAGCTCAAATCTGAAATTGCTGTTGATACGGAACTCATAACCCTGTTGCATACAGACTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATTCCTATCCGTAGTTGTGGAACAAGTGAGTCAAATGAGGTTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCATTAGGTGCTGCAGCCTCTGCATATGGATATACGCTTTTTGAGCGGACATCAGGACATATAGTTATTGATGTCAATGGCGAGAAACTCAGGTTGGATGTATTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGTTAAAGGAGCTGATACTTCAATGTTTAGCATCTTAGCTGATGAAATTGACAGCAGGGATAGTATAAGGCATGCAACTCTGGGTCATTTAAATGAATATTCTTTGCAAGGTTTACGCACACTTGTAGTTGCTTCCAGGAATCTTTCGGATGCAGAACTTAAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAATTGATAGAGGTGCAAAACTACGCCAAACTGCAGCTCTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAACTGCAAGAGGGTGTACCAGAAGCCATTGAGTCCTTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATAGGCCTCTCCTGCAAACTTTTGACCTCAGATATGCAGATGATAATTATAAATGGCACATCAGAAAATGAATGCAGAAATCTTTTGGCTGATGCTAAAGCCAAATTTGGTATAAGATCTGTATGTAAAAGAAACCAGAATATGAGGCACAAAACCAATGATGGACGTGGTGATCTTGAGACTGCCAATAATACAAAGTCATTCGATATGCCTAAATGTGATCTAAGGGAAGAAGGAACTAATGCTCCACTGGCGCTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGACCTGGAGTCAGAGCAGCTTTTCGACCTTGCGACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATTTGATTAAGAGCCGCACTGATGATATGACACTGGCTATTGGTGATGGGGCCAATGATGTGTCAATGATTCAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGTTATTCTGGTATATATTATGCACTGCCTTTTCAACAACTTCTGCATTGACAGATTGGAGCAGTGTATTCTATTCTGTGATATACACATCTGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGACTTGAGTCATAAGACACTCTTGCAGTATCCAAAACTGTATGGCGCAGGTCATCGGCATGAGGCGTACAATATGCATTTATTTTGGATCACGATGATTGACACGCTATGGCAGAGTCTTGTTCTCTTCTACGTACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTGAATGTACATTTGGCTATGGACATTAGGCAGTGGGTATTAATTACACACGTTGCTGTATGGGGATCAATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCCAACTATTGGACTTTTTATCATGTGGCTAAGTCCCCTACATATTGGGTCACAATTTTGCTTATAATTATTGTGGCAATGCTACCTCGATTAGTCTGTAAAATTGTTTATCAAGTGTTTTGGCCCTCTGATATCCAGATAGCAAGAGAAGCTGAGATATTAACAAAACATCGTGATCATCTGAGGCCAAGGCAAGAAGTTTCTAGATAA 3855 0.4125 MSSDKPLLPESDCSQGIHRCSRKSGSFSRYVSFPSIIFDETQSGSFDVKDVDVVSAGDSSFHSTLEHCTFLTEKDSQSVESEFCQQLPLECSTRERRCLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIYHRSVQFEDNLVHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRVSLVLQSGDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPDCCAVSGIIRCEQPNRNIYEFTANMECNGHRFSLSQTNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEVYMNRETLWLSIFLFTMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTRGSDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINDDLGQIRYVFSDKTGTLTENKMEFRKASIHGRNYGSSLLMGDNTIVAEAVSGRGRWKLKSEIAVDTELITLLHTDSDRDERIAAHEFFLTLAACNTVIPIRSCGTSESNEVVECIEYQGESPDEQALGAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSILADEIDSRDSIRHATLGHLNEYSLQGLRTLVVASRNLSDAELKQWQSMYEEASTSLIDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTSDMQMIIINGTSENECRNLLADAKAKFGIRSVCKRNQNMRHKTNDGRGDLETANNTKSFDMPKCDLREEGTNAPLALVIDGNSLVYILEKDLESEQLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYVPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIRQWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWVTILLIIIVAMLPRLVCKIVYQVFWPSDIQIAREAEILTKHRDHLRPRQEVSR 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1101 1284 Gene3D - 229 398 - -
Lele43g1101 1284 FunFam Phospholipid-transporting ATPase 802 1030 - -
Lele43g1101 1284 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1257 IPR023298 -
Lele43g1101 1284 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Lele43g1101 1284 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 819 IPR023299 GO:0000166
Lele43g1101 1284 Gene3D - 803 1030 IPR023214 -
Lele43g1101 1284 Gene3D - 650 783 IPR023299 GO:0000166
Lele43g1101 1284 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 169 1265 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele43g1101 1284 Pfam Phospholipid-translocating P-type ATPase C-terminal 1018 1258 IPR032630 -
Lele43g1101 1284 FunFam Phospholipid-transporting ATPase 649 793 - -
Lele43g1101 1284 SFLD p-type atpase 526 1041 IPR044492 -
Lele43g1101 1284 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Lele43g1101 1284 Pfam E1-E2 ATPase 255 500 - -
Lele43g1101 1284 SUPERFAMILY HAD-like 537 1036 IPR036412 -
Lele43g1101 1284 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 960 1076 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele43g1101 1284 PRINTS P-type cation-transporting ATPase superfamily signature 990 1009 - -
Lele43g1101 1284 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Lele43g1101 1284 SFLD C1.7: P-type atpase like 526 1041 - -
Lele43g1101 1284 Pfam Cation transport ATPase (P-type) 652 727 - -
Lele43g1101 1284 CDD P-type_ATPase_APLT_Dnf-like 171 1150 - -
Lele43g1101 1284 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 143 1268 - -
Lele43g1101 1284 SUPERFAMILY Calcium ATPase, transduction domain A 252 394 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1101 Lele-ChrLele43 19418462 19424807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1101 132 1274 Primary Pumps ATPases AT5G04930 57.168 0.0 1324