Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1091 ATGCTGGGTCCGAGATCATATGGATTTGGATTGTCTTTTTCGTTTTTCTGTTTCATCCTCACAGCAGCAGCACAAAAGACAGATCCTTCGGAAGTGAATGCACTGATCCAAATCAAGAAAAGTTTGATTGATCCCAAGAACCATCTGAGGAACTGGAACAAGGGCGACCCATGTAATTCAAACTGGACTGGTGTTTGGTGTTTTGATAGGGTTGGGACTGATGGATACCTACATGTCCATGAGCTTTACTTAATGACTTCGAATCTCTCGGGAAGTCTAGCACCTCAGCTTGGTCTGCTATCTAGGCTTCAGATAATGAATTTTATGTGGAATGATCTGACAGGCACCATGCCAAAGGAGATAGGAAATATCAAATCATTGAAACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCTATCTCTCAAACTTGAATAGGCTCCAAGTTGACCAAAACCAATTGTCAGGTCCAATACCACAATCGTTTGCCAACATGGTCAATGTTAAACACCTCCACTTGAACAACAATTCATTCACTGGTCAAATTCCACGTGAACTTTCAAAGTTACCCAATCTACAGCATTTGCTTGTGGACAATAACAACTTTTCTGGCCGTCTTCCACCAGAATTTTCCATGTTACCGGCCTTGCGCATACTCCAAGTTGATAACAATAATTTCAATGGAGCAGAAATTCCTTCTACCTATGCAAACCTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGGAAGGAGCTGTTCCTGATCTGAGTTCGATAAACGAGCTTAGCTATTTGGATCTTAGCTGGAATCATCTTACTGGATCCGTACCACCAAAGAAACTTTCAGATAATATGACAACTATTGACCTATCAAATAACAAGATCAACGGATCTATTGCTGAAAGCTTCAAATTACTTCCTTCACTTCAAAGATTGTCACTAGCAAACAATTCTTTTTCTGGATCCATCGCTATGGGAATATTGCTGAACATGTCCTTCAGTAGGAGTGCTAAGCTCACAATTGATCTGCGCAATAATTCCTTTTCAGACATTTCAGGCAGTTCAAGTCTACCAGCAAATATCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCTAACATTAAAGATATCAGTCGATATTGTGCCTCCGAAGGGGTTGAATCTGACAAACCGATAAATTCAACATCTGGCTGTCCTGTTCAAGCTTGTCCAGGGGATGATTCCTATGAATACGTCCCAGCTTCTCCTGTTCCTTGCTATTGTGCAGCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCGTACTTTCCTCCTTATAGAACTTATTTTGAGTTATATCTGGCTCAGAATTTACATTTGGACCTATACCAAGTTTGGATAGATTCAATTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCTCTCTCATGTGTTCAATATAAGCGAGGTCCGGCGTATTCAAGGCAAATTTGGATCATGGAATTTCCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGACCTTATGAACATTTAATTGGTGGCGAGACTGATAAGAGGAAGATCAGTACAACCATATTGATAGTTGCCATAATTGCAGCTGTTGTTTGTGCTACCACGATCTCTGCAATTGTCACTCTCGTGATAGCCAAAAGACATATCAAATACCATCCCATGCTATCGAGGAGTCGTATGTCCTCTAATGTTTGCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTAACAATTTCAGCAGTTCAACTATAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGAATTCTGTCCGATAAAACTGTTGTGGCCGTGAAGCGGGTAGATGAAGGTTCTTTACAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTTGGATACTGTAATGAAGAAGGAGAGCAGATTCTGGTTTACGAGTTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCGGGTAAAAGGAAGGGAAACCTAAACTTTGGTATGAGGTTGAGGTTTGCAATGGGCGCTGCCAAAGGCATACTGTATCTCCATGCCGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGGACCGCATTCTGGTCGCTAAAGTGGCTGACTTTGGACTCTCACGTCTTGCACCGAATATGGATGACGATGGAAACATGCCTAAATATGTGTCAACAGTTGTGAGGGGAACACCGGGATACCTTGATCCTGAGTACTTTTTGACTCACAAGTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAAGCATGCATCCAATATCACATGGGAAAAACATCGTCCGTGAGGTTAACGAGGCTCGTCAGTGTGGGACGATATCTTCGATTATAGATAGCAAAATGGGTTCTTATCCATCAGATTGTGTGGAGAAGTTTCTAAATCTTGGTCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCATGCATGACAGATGTGGTGAGGGAGCTGGAGATTATTCTTTCAATGTTGCCAGATTCCGAAACTGCTTTCCTAGACAGTCCATCTGATTTTTCTGTCAAAATGGCTTCAACATCATCATCTTCATCAACATCCTACATGGCAAGAGACGGCAACCAACACATGTCCTCTCCTATGTTATCAGGAAGCAACCTCGTAAGCGATGTTATTCCCACCATTGTTCCTCGTTAA 2874 0.4165 MLGPRSYGFGLSFSFFCFILTAAAQKTDPSEVNALIQIKKSLIDPKNHLRNWNKGDPCNSNWTGVWCFDRVGTDGYLHVHELYLMTSNLSGSLAPQLGLLSRLQIMNFMWNDLTGTMPKEIGNIKSLKLLLLNGNKLSGSLPDELGYLSNLNRLQVDQNQLSGPIPQSFANMVNVKHLHLNNNSFTGQIPRELSKLPNLQHLLVDNNNFSGRLPPEFSMLPALRILQVDNNNFNGAEIPSTYANLSKLVKLSLRNCSLEGAVPDLSSINELSYLDLSWNHLTGSVPPKKLSDNMTTIDLSNNKINGSIAESFKLLPSLQRLSLANNSFSGSIAMGILLNMSFSRSAKLTIDLRNNSFSDISGSSSLPANITLRLAGNPICKNSNIKDISRYCASEGVESDKPINSTSGCPVQACPGDDSYEYVPASPVPCYCAAPLRIGYRLKSPSFSYFPPYRTYFELYLAQNLHLDLYQVWIDSIAWEAGPRLRMYLKLYPNYNDSLSHVFNISEVRRIQGKFGSWNFPRTDFFGPYELLNFTLLGPYEHLIGGETDKRKISTTILIVAIIAAVVCATTISAIVTLVIAKRHIKYHPMLSRSRMSSNVCIKIDGVKAFTFKELAHATNNFSSSTIVGQGGYGKVYKGILSDKTVVAVKRVDEGSLQGQREFLTEIELLSRLHHRNLVSLVGYCNEEGEQILVYEFMPNGTLREWISGKRKGNLNFGMRLRFAMGAAKGILYLHAEANPPIFHRDIKASNILLDRILVAKVADFGLSRLAPNMDDDGNMPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTSMHPISHGKNIVREVNEARQCGTISSIIDSKMGSYPSDCVEKFLNLGLSCCHENPEERPCMTDVVRELEIILSMLPDSETAFLDSPSDFSVKMASTSSSSSTSYMARDGNQHMSSPMLSGSNLVSDVIPTIVPR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1091 957 SMART serkin_6 622 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1091 957 Gene3D Ribonuclease Inhibitor 290 435 IPR032675 -
Lele43g1091 957 FunFam Leucine-rich repeat protein kinase family protein 586 697 - -
Lele43g1091 957 CDD STKc_IRAK 628 894 - -
Lele43g1091 957 Gene3D Phosphorylase Kinase; domain 1 585 697 - -
Lele43g1091 957 SUPERFAMILY L domain-like 45 386 - -
Lele43g1091 957 Gene3D Ribonuclease Inhibitor 190 289 IPR032675 -
Lele43g1091 957 PANTHER RECEPTOR-LIKE PROTEIN 55 38 896 - -
Lele43g1091 957 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Lele43g1091 957 SUPERFAMILY Protein kinase-like (PK-like) 607 927 IPR011009 -
Lele43g1091 957 Gene3D Transferase(Phosphotransferase) domain 1 698 905 - -
Lele43g1091 957 Gene3D Ribonuclease Inhibitor 28 189 IPR032675 -
Lele43g1091 957 Pfam Leucine rich repeat 149 209 IPR001611 GO:0005515
Lele43g1091 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Lele43g1091 957 Pfam Protein tyrosine and serine/threonine kinase 626 891 IPR001245 GO:0004672|GO:0006468
Lele43g1091 957 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Lele43g1091 957 ProSitePatterns Protein kinases ATP-binding region signature. 628 650 IPR017441 GO:0005524
Lele43g1091 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 698 907 - -
Lele43g1091 957 ProSiteProfiles Protein kinase domain profile. 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1091 Lele-ChrLele43 19328378 19336887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1091 5 903 Receptor kinase-like Gene Family AT5G01950 60.797 0.0 1095
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele43g1091 Pkinase 2.2e-47 CL0016