Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1089 ATGGAGACGAATTTTAGAGGCATGCCTGCAAATTGCAATCGTAGGGTTCGAGAGATCAGAAACTGTAACTTCATAAGGTTTTCTGATTCAGAATTTCTTTCTCACATTCATTCGCCCAAACTCATCACACTCTTCCGTCTTCCTCTTTGCCATTCCTCACCCTCATTCTCTAACTTTCAGATCGTGGGTTTAGGCCGAACAACCATGGCAGCCATGGCTCAGCTCCGTTTTTCTCCCCTCTCTCGTTCATACCACACCGTTTCAGGGTCAGACGCTGGCGCATTCAGTCCCCGTTCCATTATTTCGTTTCCATCTTCTTTACACACTCGAAATCAATCTCTGCCTCTCATCAACCCAAAGGTCTACGAGCCCAATTGGCCGGAGAATCTGCAAATTTCATTCGCCGGCGGAGATGGTAGCGACGGAGTCGGGCGCGGAGGAGGCGACAACGGCAACGGTGGTAGCGGAAATTGGGGAAACAGCGATGATCATCCATCTTCACCGTCGTCTAACGAACTCGGTATTCTGGGCATGTTTCTAGCAGGATGGAGATCGAGGGTTGCCGCGGATCCCCAATTCGGTTTCAAGGTTCTGATGGAAGAATTGGTGGGTGTGAGCGCTTGTATCATCGGAGACATGGCTTCTCGTCCAAATTTCGGATTAAACGAGCTTGATTTCGTTTTCTCCACACTCGTCGTCGGATCAATTCTGAATTTCACTCTTATGTATCTATTAGCACCCACCGTGGCTTCTTCATCCTCAAAACTACCTTCAATCTTTGCAAGTTGCCCTACGAGCCACATGTTTGAACCAGGTGCTTATGGGATCGTCGATCGATTTGGAACACTGGTATACAAAGGAACCGTGTTTGCGGCAGTTGGATTTGCAGCTGGGCTTGTAGGAACTGCGATTTCAAATGGGTTAATCATGATCAGGAAGAAGATGGATCCAAATTTTGAGACACCAAACAAGCAACCTCCGACATTGTTGAATGCTATGACATGGGCGGCTCACATGGGAGTTAGCAGCAATCTGAGGTACCAAACTCTGAATGGGATTGAATTTGTGTTGGAGAAAGGGCTTCCTCCGTTGGCATTCAAATCATCTGTGTTTGTTCTGAGATTGTTGAACAATGTTGTTGGAGGCATGACGTTTGTGATGCTGGCGAGGTTCACTGGTTCACAAAGTGTATCAGAACAACAAAAGCCATTAGCTCTTGCAGCACAGAAAGAGGGCTTGGAGAGCAGAGAAGAGGATTTGCAGAGCTCAAAGTGA 1275 0.4737 METNFRGMPANCNRRVREIRNCNFIRFSDSEFLSHIHSPKLITLFRLPLCHSSPSFSNFQIVGLGRTTMAAMAQLRFSPLSRSYHTVSGSDAGAFSPRSIISFPSSLHTRNQSLPLINPKVYEPNWPENLQISFAGGDGSDGVGRGGGDNGNGGSGNWGNSDDHPSSPSSNELGILGMFLAGWRSRVAADPQFGFKVLMEELVGVSACIIGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTVASSSSKLPSIFASCPTSHMFEPGAYGIVDRFGTLVYKGTVFAAVGFAAGLVGTAISNGLIMIRKKMDPNFETPNKQPPTLLNAMTWAAHMGVSSNLRYQTLNGIEFVLEKGLPPLAFKSSVFVLRLLNNVVGGMTFVMLARFTGSQSVSEQQKPLALAAQKEGLESREEDLQSSK 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1089 424 MobiDBLite consensus disorder prediction 137 169 - -
Lele43g1089 424 MobiDBLite consensus disorder prediction 153 169 - -
Lele43g1089 424 Pfam Protein RETICULATA-related 186 353 IPR021825 -
Lele43g1089 424 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 159 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1089 Lele-ChrLele43 19311197 19317902 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0281 41 2295834 2303823 Lele43g1089 43 19311197 19317902 hybridization
Lele42g0276 42 2347543 2348616 Lele43g1089 43 19311197 19317902 hybridization