Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1088 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCCGATCAATATAAATCAGCTCAGGGGCAGTGGCTGATGCAACATCAACCATCCATGAAGCAAATTATGGCAATTATGGCCGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCCAAGAACGGAATAATGCCATCGTGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGAGAGAACTCCTTAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAAGTACACCATTTACCTCATATGGGTGAAACTTCTTACAGCACACGGGAAATGCACACTAGTGATGACCTTCCAACAGCATCCATGCCTAATGAAGCTGGGAAATCTCGGCGGACTAAGCAACCCAAGGATGGTAAGACAATTTCACCTAGTAAGAAGACACCAAGAGCTGCAAAAAAGCTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGCACATGAATGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGACCCATCAAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACTGGTGTTCCGAGACAGTGTTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCGCTTCCAGCAGTGCCCAACAAGAGGCATGCTAGGGTTGGTGGACGAAAGATGAGTGGAGGTGCTTTCAATAAGCTTCTTAGCCGGCTTGCGGCAGAGGGCCATGATCTATCAAACCCAGTTGATCTGAAGGACCATTGGGCCAAACATGGCACGAACCGTTATATCACAATCAAGTAG 1011 0.4669 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIQERNNAIVERDNAIATLQYRENSLANGSMSSCPPGCQIARGVKHVHHPQQVHHLPHMGETSYSTREMHTSDDLPTASMPNEAGKSRRTKQPKDGKTISPSKKTPRAAKKLKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLDPSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVPRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1088 336 MobiDBLite consensus disorder prediction 136 158 - -
Lele43g1088 336 MobiDBLite consensus disorder prediction 159 173 - -
Lele43g1088 336 Pfam GAGA binding protein-like family 1 336 IPR010409 -
Lele43g1088 336 MobiDBLite consensus disorder prediction 127 186 - -
Lele43g1088 336 MobiDBLite consensus disorder prediction 1 21 - -
Lele43g1088 336 SMART GAGA_bind_2 1 336 IPR010409 -
Lele43g1088 336 Coils Coil 51 71 - -
Lele43g1088 336 MobiDBLite consensus disorder prediction 1 15 - -
Lele43g1088 336 PANTHER - 1 336 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1088 Lele-ChrLele43 19309586 19310732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1088 65 336 BBR or BPC Transcription factor family AT5G42520 63.356 2.48e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele43g1088 GAGA_bind 9.1e-108 No_clan