Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1076 ATGACAGAATCAACAATAACCACACACAACAACGAAGACCAGATCATGGTCTCACAAAGTAGAATCAAGAAGAGAAGAAGGTGTTGTCTTCTTCTTGGGTTACTTCTACTTTTAGTGATACTAATCTTCATTGTTGCTCTGGTTCTGGCCTTAACGGTGTTCAAGCCTAAGAACCCAACAGTTCAACTCGTGTCAGCTTCTCTTGACGGTGTAACACCAAGTGTCTCTTTCCCTACCATTCAGGTTCATCTCAATCTCACTCTTGATATCAATCTCATGGTTCATAACCCAAACCATGCCAGCTTCAAGCATGAACAAGGCAAGAGCATCTTGTTTTACAAGGGCAATCAGATCGGAGACACGGAGATCTTTCCCGGCGTGATTCCGGCGAAGGGGTCGGCCGTGCTGCCCAGCCGGCTTACGTTGCAGGCGGACAGACTAGCTTCCAATGTTACAAGTTTGATGGGAGATTTAATGGGTGGAGAACTGTCTATGGAATCATCTACTCAGATTCCAGGCAGAGTCACCATCCTTGGATTCATTAAAAGACATGCTGTTGCGCTTTCCGAATGTCAGTTCACTATTGACGTTTCCGACAGGAAGATTCGGTCCCAAACTTGCAAAAATAAGACCAAGTTTTGA 642 0.4502 MTESTITTHNNEDQIMVSQSRIKKRRRCCLLLGLLLLLVILIFIVALVLALTVFKPKNPTVQLVSASLDGVTPSVSFPTIQVHLNLTLDINLMVHNPNHASFKHEQGKSILFYKGNQIGDTEIFPGVIPAKGSAVLPSRLTLQADRLASNVTSLMGDLMGGELSMESSTQIPGRVTILGFIKRHAVALSECQFTIDVSDRKIRSQTCKNKTKF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1076 213 Pfam Late embryogenesis abundant protein 92 189 IPR004864 -
Lele43g1076 213 SUPERFAMILY LEA14-like 40 166 - -
Lele43g1076 213 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 23 207 - -
Lele43g1076 213 Gene3D - 44 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1076 Lele-ChrLele43 19217212 19217853 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1076 43 19217212 19217853 Lele43g1076 43 19217212 19217853 ECH
Lele41g0294 41 2406197 2406838 Lele43g1076 43 19217212 19217853 hybridization
Lele42g0289 42 2461516 2462154 Lele43g1076 43 19217212 19217853 hybridization