Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1075 ATGAAGACGGAAGAATCTCGTAAACGGAGGAATCTCTGCCTCCCCGTCACGGCAGCTCTGGTGATCGCAATTGTCTTAATCGTGGTGGTTTTAGTCTTCACGGTGTTCAAACCCAAGCGTACCGTCGACACCGTCGATTCCATCACGATTCAGGAGATGCACGCCGGTCTCAACGTTGCTAAGCTCATCCTAGATCTCAATATCACCCTCGGCATCCAAGTCTCCATCATTAACCCGAATCATGTCGGATTCAAGTACTCCGAATCCAACGCTCTCCTAAATTACAGAGGCCAGCTAGTCGGAGAAGCACCAATTCAGGCCGGCGAGATCTCCGCCGGCGAGAAAGAGACAATAACAGTCAGTCTGACCATCATGGCGGACCGACTCCTCTCTAATTCTAAGCTTTTCTCCGATTATTTAGCCGGTTCGTTGCCTCTCAGCACTTGGATTAGGATTTCTGGGGAAATAAGCATCTTAGGGTTAATTCATGTGGGTGTGGTTTCAACTTCATCATGCGATTTTGCCATCAATATCTCCAATAAAACTATAGGCCATAAAGAGTGCCGTTACAAAACTAAGCTTAATTAA 588 0.4711 MKTEESRKRRNLCLPVTAALVIAIVLIVVVLVFTVFKPKRTVDTVDSITIQEMHAGLNVAKLILDLNITLGIQVSIINPNHVGFKYSESNALLNYRGQLVGEAPIQAGEISAGEKETITVSLTIMADRLLSNSKLFSDYLAGSLPLSTWIRISGEISILGLIHVGVVSTSSCDFAINISNKTIGHKECRYKTKLN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1075 195 Gene3D - 35 182 - -
Lele43g1075 195 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 6 180 - -
Lele43g1075 195 SUPERFAMILY LEA14-like 66 160 - -
Lele43g1075 195 Pfam Late embryogenesis abundant protein 74 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1075 Lele-ChrLele43 19212805 19213392 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1075 43 19212805 19213392 Lele37g1417 37 22866707 22870526 CCT
Lele43g1075 43 19212805 19213392 Lele38g1293 38 23665016 23665979 CCT
Lele43g1075 43 19212805 19213392 Lele39g0007 39 69341 72073 CCT
Lele43g1075 43 19212805 19213392 Lele40g1241 40 22162877 22166820 CCT
Lele39g0009 39 89230 91371 Lele43g1075 43 19212805 19213392 CCT
Lele40g1238 40 22147559 22148834 Lele43g1075 43 19212805 19213392 CCT
Lele41g0295 41 2409992 2410579 Lele43g1075 43 19212805 19213392 hybridization
Lele42g0290 42 2464978 2465562 Lele43g1075 43 19212805 19213392 hybridization