Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1064 ATGTCCGTTCTACTCAAGGAAGGAGGAGTAGTTTCTGCTTCCTCTTCATCTTCTTCATGGAACCACCACAGGCTCAACAACAACAACCATACCCACAACCCTTTCCCCCTTCACACGATCAGCAAAATCGAAGAAAGCGATGAAGAACAGTTCAGAGTGCCGGACATGGAAGCGACGGCCGGAGACGGCGGAGAGTGTGGGGGTGGAGGAGGAGGAGGGACTGTTGTTTCGAATGGGAATGAGAAGGCAGCGGGGAGCTTAAGCAATGTGACAGTGACGGTGACAGATCGTCAGTTTCAGAGTAATGGAAAACGAAGAAGAGGAAGAAATCCTGCAGATAAAGAGTGCAGACGCCTTAAGAGGTTATTAAGAAATAGGGTATCAGCACAGCAAGCAAGAGAAAGGAAGAAGGTATATGTTAATGAGTTGGAAGGAAGAGCTAAGGAGTTGCAAGACAAGAATTGCAAGTTGGAAGAGCGTATCTCTACTTTGATCAATGAGAACACTATGCTTCGTAAGGTTCTTATGAACACAAGGCCTAAACCTGATGACTCCACCGAACAACCAAAGCAGGATTAA 579 0.4663 MSVLLKEGGVVSASSSSSSWNHHRLNNNNHTHNPFPLHTISKIEESDEEQFRVPDMEATAGDGGECGGGGGGGTVVSNGNEKAAGSLSNVTVTVTDRQFQSNGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGRAKELQDKNCKLEERISTLINENTMLRKVLMNTRPKPDDSTEQPKQD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1064 192 MobiDBLite consensus disorder prediction 1 35 - -
Lele43g1064 192 Coils Coil 133 160 - -
Lele43g1064 192 MobiDBLite consensus disorder prediction 100 114 - -
Lele43g1064 192 MobiDBLite consensus disorder prediction 9 35 - -
Lele43g1064 192 Gene3D Single helix bin 136 177 - -
Lele43g1064 192 SUPERFAMILY Leucine zipper domain 117 176 IPR046347 GO:0003700|GO:0006355
Lele43g1064 192 SMART brlzneu 113 177 IPR004827 GO:0003700|GO:0006355
Lele43g1064 192 MobiDBLite consensus disorder prediction 57 81 - -
Lele43g1064 192 FunFam Transcription factor HY5 136 177 - -
Lele43g1064 192 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 14 185 IPR044280 GO:0000981|GO:0045944
Lele43g1064 192 MobiDBLite consensus disorder prediction 95 114 - -
Lele43g1064 192 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 115 178 IPR004827 GO:0003700|GO:0006355
Lele43g1064 192 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 120 135 IPR004827 GO:0003700|GO:0006355
Lele43g1064 192 CDD bZIP_HY5-like 127 168 - -
Lele43g1064 192 Pfam bZIP transcription factor 114 173 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1064 Lele-ChrLele43 19108287 19110312 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1064 101 184 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 78.571 3.05e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele43g1064 bZIP_1 2.3e-12 CL0018