Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1063 ATGGGACAGAACAACTATGATGGACTTGAACGTCCTCCAACATTCTCTGTCTCTCTTGGGACAGCCATTGCTGCTACTGTAAATCTTACTATAGATGATCCCTGGACTGAAGAGTTTGTATGGACAGTCAATAAGGACACGTTGCCCTTCTGTTTACTTGCTGCCTCAAATGGTGGATTCCCTGTGATTTCTTCACTCGAAATCCGACCTCTTCCTCGAGGAGCCTACACAAATGACGTGGAAAATTTCTCAAGTAAGTTACTGAGGAAGAGTTATCGAATTGATTGTGGCTCTGCTAATGAGTCTATCCTGTACCCCTTGGATCCATATGATAGAATATGGGAAGCTGATAGAAGTTTTACACACTTTCATGTTGCAACTGGATTCAAGATACAGCTTACTTTCAATCAGTCCAGTCTGATGGAAAAACCATCAGCTGCTGTTCTTCAAACCGGGAGAGTTTTGGCACGGCGAAATCTGCTGACATATAACCTCCCTCTTGATGCTTTAGGGAACTACTATATCATTCTTTATTTTGCTGGCATACTTCCTGTTTTCCCCTCATTTGATGTCTTTTACCCTCAAATCAATGCATTTGAGGTATATCAAATCGTTGATATTCCATCTGAAGTTTCTTCAACCACAGTCTCAGCACTACAGGTTATTCAGCAGTCTCCTGGCTTGGATCTAGGATGGCAAGATGATCCATGTTCTCCTTCACCATGGGATCATATTGGATGTGAAGGAAGACTTGTTCATCTTTTGTCAAAAATCCGCCATCAAAATCTTGTGTCATTGGAAGGACTTTGCTATGAATCAAAGCATCAGATACTAGTGTATGAGTACTTGGATGGTGGATCACTAGCTGATCATCTCTATGATGAGAAGATGAATGGGAAAGTCTGTGACTTTGGCCTCTCTAAGCAAGTAACCAAGGCAGATGCAACTCATGTCACCACTGTTGTCAAGGGCACTGCTGGCTATCTAGATCCTGAGTATTATTCCACCCAACAGCTCACTGAGAAAAGTGATGTATATAGCTTTGGAGTTGTCCTATTGGAACTCATCTGTGGGAGAGAGCCATTAAAATTGAACATAGAGCCATGTGCTAAAACCGCCATTGGAGACGTTCTTGAAGCTGAGCAACTCCAGTCACTACCTGCAACAAGGATGGTGATGATGATTACGTTGAGGGGTTTGAATGTGGTCAGAGACGAAAGGAAGCTTCTGGTCCATGTGTAG 1242 0.4275 MGQNNYDGLERPPTFSVSLGTAIAATVNLTIDDPWTEEFVWTVNKDTLPFCLLAASNGGFPVISSLEIRPLPRGAYTNDVENFSSKLLRKSYRIDCGSANESILYPLDPYDRIWEADRSFTHFHVATGFKIQLTFNQSSLMEKPSAAVLQTGRVLARRNLLTYNLPLDALGNYYIILYFAGILPVFPSFDVFYPQINAFEVYQIVDIPSEVSSTTVSALQVIQQSPGLDLGWQDDPCSPSPWDHIGCEGRLVHLLSKIRHQNLVSLEGLCYESKHQILVYEYLDGGSLADHLYDEKMNGKVCDFGLSKQVTKADATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLKLNIEPCAKTAIGDVLEAEQLQSLPATRMVMMITLRGLNVVRDERKLLVHV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1063 413 Gene3D - 89 224 - -
Lele43g1063 413 Pfam Malectin-like domain 4 203 IPR024788 -
Lele43g1063 413 SUPERFAMILY Protein kinase-like (PK-like) 252 363 IPR011009 -
Lele43g1063 413 PANTHER OS07G0107800 PROTEIN-RELATED 5 182 - -
Lele43g1063 413 Gene3D Phosphorylase Kinase; domain 1 249 284 - -
Lele43g1063 413 Gene3D Transferase(Phosphotransferase) domain 1 287 408 - -
Lele43g1063 413 Pfam Protein kinase domain 292 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1063 413 ProSiteProfiles Protein kinase domain profile. 49 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1063 Lele-ChrLele43 19096627 19102808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1063 252 368 Receptor kinase-like Gene Family AT5G48740 59.394 4.76e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele43g1063 Malectin_like 2.6e-29 CL0202