Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1038 ATGGCTTTTGCCTCCATTTCATTCTCTTTTCTTCCCAAATACATCCTTCAACCATTAATCCTTATCATCTTGGTCTACATAAACTTGCTTTGCTTCCAGCATGTCAGAGCTACCTCAAATGAGACTGATTATTTGACATTGCTCAACTTTAAAGAATCATTAACTTATGATCCTCATGAAATCTTGAGTTCTTGGAACAGTTCGAACCACTTCTGCAGTTGGACTGGAATCGCTTGCGGCCACAAGCATCAGCGAGTCACAGAGTTGGATTTGGGAGGTAATCATCTCGGTGGGATCATATCGCCTCACGTTGGGAATCTCTCTTTCTTGACAACTCTCAACCTCAACGACAATAGTTTCCATGGAGAAATCACACCGGAGTTGGGACGTTTGTTCAGATTAAAGTCACTCGGTCTCTCAAACAACACATTGACAGGAGAGATTCCTTTGAACTTGACGAGTTGCACTCAATTGAGGATCTTGTTTTTGCCAGGGAATAGTCTTACTGGTAAAATACCATATCAGCTAGGGGCGCTTCAAAAGCTTGAACGGTTGCAGCTTTCATCCAACAATTTAAGTGGAGAAATCCCATTGTCAATATGGAATCTTACTTCCCTCTCTCATCTTGCACTTGGCTATAATAACTTGAAAGGAAGCATACCTGAAGAGATAGGCCACTTGAAGAATTTGACATTTTTTGCAGTGCCAAAGAATAGTTTCTCAGGTGCTCTTCCTTCTTCACTTTACAATCTTTCATCTCTCACTCTGATATCAGTAGGAAGAAACTATCTCAATCACACGAGACTTCCAAACAACATGTTCTCCAGCCTCACTAATTTGAAATATTTTGGCATAGCTGGGAATCAAATTTCAGGTTCAATACCAAATTCCATCACTAATGCATCTTCACTCCAAGTTTTTGATATTCCTTCAAATTACTTTTTTGGTGAAGTTCCCAATCTAGGAGACCTTCAAGATCTACATAGTCTAAATTTAGAATCAAATAATATTGGGAGCAGTTCAAATAGTGACCTTGATTTCATGACACTTTTGGAAAATTGTAGCAAACTTGAAATGTTAAGCTTGGCCGCTAACAAATTTGGAGGCATTTTACCCAACTCCATAGGAAATTTGTCTACCCAACTCACTGGACTATACCTAGGCGGTAATCAGATCTATGGTACTATTCCAGATACTTTAGGAAAGTACACATTTTTAACTATCTTGGGTCTGGAATACAATGAATTCTCAGGCACCATTCCAACTTCTTTTGGGAATTTCCGTGGGATAAGAGAATTGGCTCTGGATGGAAACCAACTCTCAGGAGAGATACCGGCTTCCTTAGGTAACCTTAGTGAATTGATTTTGCTAAGAATTTCAGGTAATATGCTTGAAGGAAAAATTCCTACCACGATAGGAAACATGAAAAGTTTGTTAAGCCTAGATCTTTCAGAAAACAATTTCAGTGGAGCTATACCCTTTCAGATTTTTAGCCTTTCTTCCTTGTCCATTTTATTAAACTTATCTCACAACTCATTCAATGGATCTTTGCCACTTGAGGTAGGAATGCTTAAAAACCTTGGCAGTTTGGATATCTCTGAAAATAACCTTTCCAAAGAGATCCCCTCGACCCTAGGAGAGTGCACAATTATGGAATACCTTAATTTACAAGGTAATTCCTTCAGTGGGCCCATGCCTCCTTCGCTAGCTTTGATGAAAGGTCTTACACATTTAGATATATCTCGAAACAACCTATCAGGACTAATACTAATAGGCCTACAGAACATTTCATCTCTTCAATACTTAAATGTTTCCTTCAACATGTTTGATGGTGAGGTGCCAACAGAAGGGGTTTTCAGCATTGCAAGTGCAATATCAGTGATTGGAAATATCAATCTTTGTGGGGGTATTTCAGAGCTGCACTTACCGCCATGCTCTAAAAAAGATGACATGCAAAGAAAACACAATGTGAAGCTCATGGTCATTGTGATTTGTGTGGCTTTTTCTCTCTTAGTGATATTTTTGTTTATTTTCTATTGGAGGCGTGATAGAAATAAGCAACCATCTTCAACTTCACCTACAATTGAACAATTTTCCAAGGTGTCATATCAAAGTCTACACATTGCAACTGAAGGTTTCTCTAACAAAAACTTCATTGGATCCGGGAGTTCTGGTTCAGTATATAAAGCAAGGCTAGAATCAGAAGATAAAGCTGTTGCAATAAAGGTACTAGACCTTCAAAAGAAGGGAGCTGAAAAGAGTTTCATTTCAGAATGTAATGCATTGAAAAACTTAAGGCATCGAAATTTGGTAAAAATTTTGACATGTTGCTCGAGCGTTGATTACAAGGGACTAGAATTTAAGGCGTTGGTCTTTGAGTACATGTCAAATGGAAGCCTTGAAAAATGGTTGCATCCCAACCAAGAAAGCACATATAGGTCAACATTGGATATTTGTCAAAGATTTAATGTTATATATGATGTTGCCTTAGCACTACATTATCTTCATTATGAAAATGAGCAACCAGTGGTCCATTGTGACTTAAAGCCCAGCAATATCCTTCTTGACGATGATATGGTGGCTCATGTGAGTGATTTTGGGTTGGCAAGACTACTTGCCACCATTAATGGCGGTTCTCAAAAGCAAACAAGCACATCTGGAATAAAAGGGACGATTGGCTATACTCCTCCAGAGTACGGAATGAGTTCTGAGGTGTCAACACAGGGTGATGTATATTCCTTTGGCATCCTTATTTTGGAAATATTAACCGGAAAAAGACCAACTGAGATAATGTTTGAAGATGGCCAATATCTTCATAGCTACATCAAAGTTGCATGTCCAAACAATCTTCTGGAGATTGTGGACACAGCTCTTGTACAACAGACAAAAATAGTAGCTGGAGGAGAAATTAGCATGGAGGAGATGGCTCTTATGCATCCCAAGCATGAGAAGACTCTGATTTCACTGTTTGAGATTGGACTTGCATGTTCAGTACAATCTCCAAAGGAAAGGATGAACATGATGGGTGTGCTAAGGGAGCTGAATCAAATTAAAAATGTTTTTGGTCTTGCAGAAACAAGGCGATGTTGA 3090 0.3883 MAFASISFSFLPKYILQPLILIILVYINLLCFQHVRATSNETDYLTLLNFKESLTYDPHEILSSWNSSNHFCSWTGIACGHKHQRVTELDLGGNHLGGIISPHVGNLSFLTTLNLNDNSFHGEITPELGRLFRLKSLGLSNNTLTGEIPLNLTSCTQLRILFLPGNSLTGKIPYQLGALQKLERLQLSSNNLSGEIPLSIWNLTSLSHLALGYNNLKGSIPEEIGHLKNLTFFAVPKNSFSGALPSSLYNLSSLTLISVGRNYLNHTRLPNNMFSSLTNLKYFGIAGNQISGSIPNSITNASSLQVFDIPSNYFFGEVPNLGDLQDLHSLNLESNNIGSSSNSDLDFMTLLENCSKLEMLSLAANKFGGILPNSIGNLSTQLTGLYLGGNQIYGTIPDTLGKYTFLTILGLEYNEFSGTIPTSFGNFRGIRELALDGNQLSGEIPASLGNLSELILLRISGNMLEGKIPTTIGNMKSLLSLDLSENNFSGAIPFQIFSLSSLSILLNLSHNSFNGSLPLEVGMLKNLGSLDISENNLSKEIPSTLGECTIMEYLNLQGNSFSGPMPPSLALMKGLTHLDISRNNLSGLILIGLQNISSLQYLNVSFNMFDGEVPTEGVFSIASAISVIGNINLCGGISELHLPPCSKKDDMQRKHNVKLMVIVICVAFSLLVIFLFIFYWRRDRNKQPSSTSPTIEQFSKVSYQSLHIATEGFSNKNFIGSGSSGSVYKARLESEDKAVAIKVLDLQKKGAEKSFISECNALKNLRHRNLVKILTCCSSVDYKGLEFKALVFEYMSNGSLEKWLHPNQESTYRSTLDICQRFNVIYDVALALHYLHYENEQPVVHCDLKPSNILLDDDMVAHVSDFGLARLLATINGGSQKQTSTSGIKGTIGYTPPEYGMSSEVSTQGDVYSFGILILEILTGKRPTEIMFEDGQYLHSYIKVACPNNLLEIVDTALVQQTKIVAGGEISMEEMALMHPKHEKTLISLFEIGLACSVQSPKERMNMMGVLRELNQIKNVFGLAETRRC 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1038 1029 SMART serkin_6 713 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1038 1029 Gene3D Transferase(Phosphotransferase) domain 1 795 1024 - -
Lele43g1038 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Lele43g1038 1029 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Lele43g1038 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 651 - -
Lele43g1038 1029 Gene3D Ribonuclease Inhibitor 163 270 IPR032675 -
Lele43g1038 1029 ProSiteProfiles Protein kinase domain profile. 713 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1038 1029 SMART LRR_typ_2 524 548 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 475 499 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 572 595 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 251 276 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 179 202 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 107 131 IPR003591 -
Lele43g1038 1029 SMART LRR_typ_2 203 227 IPR003591 -
Lele43g1038 1029 ProSitePatterns Protein kinases ATP-binding region signature. 719 742 IPR017441 GO:0005524
Lele43g1038 1029 Pfam Protein kinase domain 714 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1038 1029 Gene3D Ribonuclease Inhibitor 43 158 IPR032675 -
Lele43g1038 1029 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 80 346 - -
Lele43g1038 1029 SUPERFAMILY L domain-like 40 337 - -
Lele43g1038 1029 SUPERFAMILY Protein kinase-like (PK-like) 686 1014 IPR011009 -
Lele43g1038 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 795 1027 - -
Lele43g1038 1029 Gene3D Ribonuclease Inhibitor 271 649 IPR032675 -
Lele43g1038 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 684 794 - -
Lele43g1038 1029 SUPERFAMILY L domain-like 354 635 - -
Lele43g1038 1029 Gene3D Phosphorylase Kinase; domain 1 678 794 - -
Lele43g1038 1029 PANTHER LEUCINE RICH REPEAT KINASE 2 444 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1038 Lele-ChrLele43 18926969 18930196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1038 39 1021 Receptor kinase-like Gene Family AT3G47570 44.734 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele43g1038 Pkinase 1.5e-43 CL0016