Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1037 ATGGAACACCTTCACTTAAGAGGGAATTCCTTCAATGGATCTATTCCTTCTTCACTAGCTTCCTTGAAAAGTCTTGCATATTTAGATATATCTTCAAACAAGTTGTCTGGGACAATAGTAATTGGCTTACAGAACATTTCTTTTCTTGAATACTTGAATGTTTCTTTCAATCTGTTGGATGGTGAGATGCCATCAAAAGGGGTTTTCAGCAATGCGAGTGCAATATCAGTAACTGGAAATACCAAACTTTGTGGAGGCATCTCAGAGCTTCACTTACCATCATGCGCCATAAAAGCTAACAGGCAAAGAAGACACCGCAATTTAAAGCTTATGGCGATTATGATTGGCTTTGCTTTTTCTCTTCTAGTGGTATTTTTGCTTACTTTCTATTGGAGGCAAAAAAGAAGTGGGAGGTTATCTTTGACAAAACCAACAATTGAACAACTTTCCAAGGTGTCATATCAAAATCTGCACATTGCAACTGAAGGCTTCTCTGTCCGCAACTTGATTGGATCTGGGAGTTTGGCTCAGTATATAAAGGAAGCAAGACTTCTCTCAACCATTAATGGCACCTCTTCCAAGCAAACCAGCACAATTGGAATAAAAGGGACTATTGGCTATGCTCCTCCACAGTATGGAATAAGTTCTGAGGTTTCAACCCAGGGTGATGCATATTCTTTCGGTATCCTTATTTTAGAAATGATAACAGGAAGAAGACCCACAGAAGAAATGTTTAAAGATGGCTACAATCTTCATAACTATGTCAAAACTGCATATCCAAATAATCCTCTGGAAATTGTAGACTCAGCTCTTTTGCCACGTCAGATACAACAGACAAGAGCAACGGAAAAGGAAATCATCATGGAAAATCTTACTATTTTGCCTCCTTATGGTGAGAAGTCCATACTTCCATTATTTGAGATCGGACTTGCTTGTTCAGTGGAATCACCAAAAGAAAGATTGAACATGATGGATGTCATGAAGGAGCTCAATCAAATTAGAAATGCTTTTCGTTTCTTTACAAGAAGAATTCTAGAGGATGTAGGCTCCATTGAATCTCTTTTGCCATTGTTAGAACTGATTTCATCACTCAACAAATTACAAGGCCACTCTGTGCAAAACAAGGAAGCTTCTGCAACAAAACTAGTAGTGATGGTCATGAATGATACCTACTTCCCAGACTTCAGAATGCCAACTTGA 1200 0.385 MEHLHLRGNSFNGSIPSSLASLKSLAYLDISSNKLSGTIVIGLQNISFLEYLNVSFNLLDGEMPSKGVFSNASAISVTGNTKLCGGISELHLPSCAIKANRQRRHRNLKLMAIMIGFAFSLLVVFLLTFYWRQKRSGRLSLTKPTIEQLSKVSYQNLHIATEGFSVRNLIGSGSLAQYIKEARLLSTINGTSSKQTSTIGIKGTIGYAPPQYGISSEVSTQGDAYSFGILILEMITGRRPTEEMFKDGYNLHNYVKTAYPNNPLEIVDSALLPRQIQQTRATEKEIIMENLTILPPYGEKSILPLFEIGLACSVESPKERLNMMDVMKELNQIRNAFRFFTRRILEDVGSIESLLPLLELISSLNKLQGHSVQNKEASATKLVVMVMNDTYFPDFRMPT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1037 399 Gene3D Ribonuclease Inhibitor 1 104 IPR032675 -
Lele43g1037 399 SUPERFAMILY L domain-like 2 85 - -
Lele43g1037 399 Gene3D Transferase(Phosphotransferase) domain 1 155 346 - -
Lele43g1037 399 SUPERFAMILY Protein kinase-like (PK-like) 196 330 IPR011009 -
Lele43g1037 399 ProSiteProfiles Protein kinase domain profile. 1 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g1037 399 PANTHER OS04G0122200 PROTEIN 190 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1037 Lele-ChrLele43 18909535 18911813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1037 1 66 Receptor kinase-like Gene Family AT5G20480 39.394 1.22e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele43g1037 None None None