Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1032 ATGCTTGAAACGATGAAATGGGTTGGTTGGGTTCATTGGGTACTATTTCTGAAGGCTTGGTTATGGGTCTCTTGTGACCAATGGCTTTTGCATTCAGTGGTAAATGTAAGGTTGTGTGATTTGGGTGCAGTAATATCAGTACTCAAGATGAGCAGTCGTTCTGTTAAGGAACGTGCTTTCCGAAGTTATCGGCGAAGGAAGGCTGTTATGGATTTGGATCTTAATAGAGCTCCACCTGGTGAGAATCGGGAGCAAGAGGGACCTTCGATTCCACCGGAACCTCAGTTTGTTCAAGCTGTCCAGCAACTACAAGATGTACAGCCTATTGATGTGGAGGCCATTGATGATGATGTCATTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGGAATCGTGGGAGGACTGTAGTTGATGTGGATATAGATTATCAGAGGTGGATAACTGAAAATACGACCAACAATGGCAGAAGAGATTCTTCAAACCAAACAATTCTTAATAATTCTGATCTGTGTATAAACTTGGAAGGCAGTGGCAGTTCTGAGTGGGAGAACGATAAAAAGTCACAGAAACCTCCAGTGGAGCCTATCTTTAGCTGTCCAATATGTATGGGCCCATTTATAGAAGAAGTGTCAACAAGGTGTGGGCATATATTTTGTAAGAGTTGCATCAAGGCTGCTATAAGTGCACAGGGTAAATGCCCTACTTGTAGGAAAAAGGTTACTGCAAAAGAGCTCATTAGGGTGTTTCTACCTTCAACTAGTTGA 780 0.4218 MLETMKWVGWVHWVLFLKAWLWVSCDQWLLHSVVNVRLCDLGAVISVLKMSSRSVKERAFRSYRRRKAVMDLDLNRAPPGENREQEGPSIPPEPQFVQAVQQLQDVQPIDVEAIDDDVIECTASAFAEAKNNSRRNRGRTVVDVDIDYQRWITENTTNNGRRDSSNQTILNNSDLCINLEGSGSSEWENDKKSQKPPVEPIFSCPICMGPFIEEVSTRCGHIFCKSCIKAAISAQGKCPTCRKKVTAKELIRVFLPSTS 259
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1032 259 Pfam Zinc finger, C3HC4 type (RING finger) 204 241 - -
Lele43g1032 259 ProSiteProfiles Zinc finger RING-type profile. 204 242 IPR001841 -
Lele43g1032 259 SMART ring_2 204 241 IPR001841 -
Lele43g1032 259 ProSitePatterns Zinc finger RING-type signature. 219 228 IPR017907 -
Lele43g1032 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 258 IPR013083 -
Lele43g1032 259 SUPERFAMILY RING/U-box 197 254 - -
Lele43g1032 259 PANTHER ELFLESS, ISOFORM B 50 259 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele43g1032 Lele-ChrLele43 18859611 18862309 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1032 58 258 C3H Transcription Factor Family AT5G48655 51.485 1.11e-50 163