Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1020 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCAATGCTTCTCAAGATTCAGCTCAGTGTGCTAAACCTAAGATCGCTCAATCTGATGGTGGAATTCAAAGCATCCTTCATAGTGTAGGAACTCAACTACTAAAAAATCCCATTGTGAAGGTGAAAGAAGAACCAGCTTCCTCAAATGTATCTGGTTCTAGCTCGTCAAAGGAGCAGTCTTGTCAGCAGTTTATTGGGCCTCCTATCAAGCGCAGAAAGCCGCATAGGAGGAAGCATATGCATAGTCAAGAATCATGTGTAATGAGAGGTGTCTATTTTAAGAATCTGAAGTGGCAGGCAGCGATTAAAGTGGACAAGAAACAGATCCATCTCGGAACCGTTAATTCTCAAGAAGAGGCCGCTCGCCTATATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCCAACTTCGAGCTTTCAGGAAAAGAGAAACAAGAACTAAGTAAATTGCAATGGGATGAGTTCTTGGCATTTACCAGACAATCAATTACCAGTAAAAAACACAGAAGAAGACTTGGCTCCAGGCAGCGCAGCGAGTCCGAGCTGCCTGCATTTCATGACGGGGACAGCCAGCAAGGTATTGATGCCACCTCAGCTTCTGAAGATGCTGATCTCGAAACATCAGATTCGTGA 720 0.4528 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLNASQDSAQCAKPKIAQSDGGIQSILHSVGTQLLKNPIVKVKEEPASSNVSGSSSSKEQSCQQFIGPPIKRRKPHRRKHMHSQESCVMRGVYFKNLKWQAAIKVDKKQIHLGTVNSQEEAARLYDRAAFMCGREPNFELSGKEKQELSKLQWDEFLAFTRQSITSKKHRRRLGSRQRSESELPAFHDGDSQQGIDATSASEDADLETSDS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1020 239 MobiDBLite consensus disorder prediction 75 92 - -
Lele43g1020 239 MobiDBLite consensus disorder prediction 195 239 - -
Lele43g1020 239 MobiDBLite consensus disorder prediction 73 110 - -
Lele43g1020 239 Gene3D AP2/ERF domain 117 168 IPR036955 GO:0003700|GO:0006355
Lele43g1020 239 ProSiteProfiles AP2/ERF domain profile. 92 171 IPR001471 GO:0003700|GO:0006355
Lele43g1020 239 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 201 - -
Lele43g1020 239 SUPERFAMILY DNA-binding domain 116 161 IPR016177 GO:0003677
Lele43g1020 239 SMART rav1_2 118 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1020 Lele-ChrLele43 18773045 18777150 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele43g1020 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0350 41 2829631 2833800 Lele43g1020 43 18773045 18777150 hybridization
Lele42g0341 42 2921036 2926459 Lele43g1020 43 18773045 18777150 hybridization