Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1015 ATGATTGCAGGGAAGAGGTATTTTGGGAATATGCAGGATGTGGATGATGAAGAGGCTCGTAGGGTTGTGATGCTGATAAAGGATTTTATGCATATTTCTAGGGAGTTTGTTCCTTCGGATTTGATTCCGTTTCTGGGATGGTTTCCTAGTGAAGGGAAAGTTCTGAGATCGATGAAGAAGATAGCGAGTGATTTGGATTCTCTGGCATCTAGTTGGGTTGAAGAACATCGTGTGAAGAAGAAAGAGTCGAGTGAAGAGAAGAAGCAGGATTTCATTGACTTCATGCTTTCTGTAATTGAAGACGACGACTCCACCTTGGGCCATACACGTGACACTATCATCAAGGCAAATATCTTGAGTCTAATCTTAGCTGGGGCAGACACAACCTCCATCAACTTGACATGGACGCTAGCCTTATTAATGAACAACAAGCACGTCTTAAAGCGTGCCCAAGAGGAGATCGATCTTCATGTAGGTAAACACAGATGGGTCCAACCTTCAGATACCAGAAACCTAATATACCTAGAAGCCATTCTTAAAGAAACCCTAAGATTATACCCACCAGGTCCTCTCTTAGTCCCTCACGAAGCAACACAAGACTGTTATATCTGTGGCTATTACGTCCCAAAAGGCACCAGAGTTTTCGCCAACGTCTGGAAACTCCATAGAGACCCTACCATTTGGTCGCAGCCTGAGAGGTTTATGCCTGAGAGATTCGTTAATGGATCAGAAATTGATAATGAAGAGGGTCGCCATTTTCAATACCTTCCTTTTGGGTCTGGTAGAAGGGCTTGTCCCGGTTCCACTTTCGCCATGCAAATGAGTGTGTTGGCTCTTGCTTGTCTGCTTCAAGGGTTTGCGTTGGAGGTTGAAGATGATGAACCAGTGGACATGAGAGAAGGCACTAGCTTTACTTTGCCTAAGGCCACTCCATTGCAAGTTGTTCTAACTCCACGACTTTCGCCTCATCAATATCACTCCCTCTTTGTTACACTCCAAAATTGTAATAATAGACAAAGATTGAAAGGGTATATCAAATGGAGTAAGGTTGCGGTTCAATTACTCTCGGTTAAGTGGACGACGGTTTTATTGCGTTGCGCTCTTTCTCTCTTCCTTTTTGTGACTGTGACTGGATCAGTTTCAGATTTCGCTTCTCTTGCTGTTTCTATAATTTCTGTGGAAGAAAATGGCCACCAATTTTTGGACATCTTCTCATTAGGTTCTTGTGGATATGCATCTTGCAGTAAGCAGCTTGTAGACCAAGAGGATGTGGATATGGTAAACCCACTTGACAAAGAAAAGGGTATCACACTTGAGGATTTTAAGCTCATAAAGATGCAGATGGCTAATTATATCTCAAAATTGGCTCAAAATGTTAAAGTTAGGCAGAGGGTTGTTGCTACTGCGGTTACATACATGAGGCGTGTTTATACCAGAAAGAGTATGGCTGAGTATGATCCACGTCTGGTGGCTCCAACCTGCTTGTACTTGGCATCAAAAGCAGAAGAAAGCACTGTGCAGGCTAGGTTGCTTGTATTTTACATTAAAAAATTATATTCTGATGACAAGTACAGATTTGAGATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAGGCACTTAACTATTACCTGGTTGTTTTCCACCCTTATCGTTCATTATCTCAGGGACTAATAAATGACACCTACAAGATGGACCTAATTCTTGTGCATCCTCCACATCTGATTGCTTTAGCATGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAGCTTCGTGTCGATATGAATGTGATTCTTGATTTCTATGAAAGCAATAGACTGTGCACAGATGAGAGGATCAATGCTGCTCTTAACAAGCTAGGCTCCAGTTATCACAGCGTCCTATTCATAAAAAGCTCATCTGCTAGTCAACTTTCAAGGACATTTGCTTTAGAACATCCTCTGAATATGGCCACTAGTGAGCTCAAAATGATTACATGTGAGGGCATGGATTACTGGGTTGGTTTAAGCCTGAGAAAGAGTATCAGTAATCTGTGA 2064 0.4205 MIAGKRYFGNMQDVDDEEARRVVMLIKDFMHISREFVPSDLIPFLGWFPSEGKVLRSMKKIASDLDSLASSWVEEHRVKKKESSEEKKQDFIDFMLSVIEDDDSTLGHTRDTIIKANILSLILAGADTTSINLTWTLALLMNNKHVLKRAQEEIDLHVGKHRWVQPSDTRNLIYLEAILKETLRLYPPGPLLVPHEATQDCYICGYYVPKGTRVFANVWKLHRDPTIWSQPERFMPERFVNGSEIDNEEGRHFQYLPFGSGRRACPGSTFAMQMSVLALACLLQGFALEVEDDEPVDMREGTSFTLPKATPLQVVLTPRLSPHQYHSLFVTLQNCNNRQRLKGYIKWSKVAVQLLSVKWTTVLLRCALSLFLFVTVTGSVSDFASLAVSIISVEENGHQFLDIFSLGSCGYASCSKQLVDQEDVDMVNPLDKEKGITLEDFKLIKMQMANYISKLAQNVKVRQRVVATAVTYMRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYSDDKYRFEIKDILEMEMKILEALNYYLVVFHPYRSLSQGLINDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVILDFYESNRLCTDERINAALNKLGSSYHSVLFIKSSSASQLSRTFALEHPLNMATSELKMITCEGMDYWVGLSLRKSISNL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1015 687 Gene3D - 423 547 - -
Lele43g1015 687 SUPERFAMILY Cyclin-like 538 615 IPR036915 -
Lele43g1015 687 Pfam Cytochrome P450 7 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PANTHER CYTOCHROME P450 82C3-RELATED 1 325 - -
Lele43g1015 687 CDD CYCLIN 536 600 IPR013763 -
Lele43g1015 687 PRINTS E-class P450 group I signature 217 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS E-class P450 group I signature 113 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS E-class P450 group I signature 265 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS E-class P450 group I signature 255 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 Pfam Cyclin, N-terminal domain 446 546 IPR006671 -
Lele43g1015 687 CDD CYCLIN 450 539 IPR013763 -
Lele43g1015 687 Gene3D Cytochrome P450 1 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 Gene3D - 414 609 - -
Lele43g1015 687 SUPERFAMILY Cytochrome P450 6 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Lele43g1015 687 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS P450 superfamily signature 256 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 PRINTS P450 superfamily signature 177 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele43g1015 687 FunFam cyclin-C1-2-like isoform X1 423 547 - -
Lele43g1015 687 SMART cyclin_7 450 540 IPR013763 -
Lele43g1015 687 SMART cyclin_7 542 631 IPR013763 -
Lele43g1015 687 SUPERFAMILY Cyclin-like 426 548 IPR036915 -
Lele43g1015 687 FunFam Uncharacterized protein 58 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1015 Lele-ChrLele43 18696907 18707542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g1015 1 320 Cytochrome P450 AT4G31940 48.466 4.17e-101 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0358 41 2897620 2903103 Lele43g1015 43 18696907 18707542 hybridization
Lele42g0347 42 2984500 2991798 Lele43g1015 43 18696907 18707542 hybridization