Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0999 ATGGAAAACGATTTCTTTCTAAATGCGGCGGCGGCTCTGCACTTCGAGCCTTCTTCGTCTTCTTCTCCTTTAATGCCCACGTGGCATTCATTCGCCTCCTCCTCCGCCATGGACATTCCAGTTTCCTCTGAGCAACCCCAGCAAGAACAACAAGAAGACTGTTTCTACAACCCAGCATGGGAAAAGTCATCTTTGGATCATCACCATCACCATCAAGCTCTTCAGTTCGATTCTGCGTTGAGTTCAATGGTTTCTTCTCCGGCAGCTTCCAATTCCAACTTGTCGAATGACGATTTCGTCATCAGAGAACTGATTGGGAAATTGGGGAATATGGGGAACTCCGGCGAGATCTCTTCTTACATGAATGGCAATAACAGTACCAATACTTCATGTTACAGCACGCCTTTGAGTTCTCCTCCTAAACTGAACATTCCTCCCCCATTGATGAACAATAATAACCAGTTGATGAAAGACAAATTACCAATGGCTTTGAATTCCACTAGTGTGGCAGAATTCTCAGCTGATCCTGGCTTTGCTGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGAACTTCAAGACAAGTTGGGATGAATAATAATGCTGACTTCACTCAGAGATCTAGTTCTCCATTAACAGAAAATGGCAAGCTTTCCAGAGTATCAAGTAGTCCATCCCTGAAAGCACTTGGATCTCAAATGGAAAATAAGAATTCTCCTTTGAATTCTCAGGAGAAATATACAATCTCCGAGCAAAACCCAAACGTGGAATCTGGGATGAAACCTTCCCCTCCTGATATGAATTCCAGAAAGAGGAAAGCTTCTTCCAAGGGAAAACCCAAAGAAATAGCTTCCAAGGCTGCTGAAGCTAATGAAGATTCAAGTGCAAAACGCAGTAAGCCAAATGAAGGGGAAGGACATGAAAATGGTCAAGTGAGAGCAGAAGAAGAATCAAAAGGAGGTAACAACAATGGAGTGGAAGAGAAACAGAACAAGAGCAACAACTCAAAACCTCCTGAGCCTCCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACTGATAGCCATAGTCTTGCTGAAAGAGTAAGGAGGGAGAAGATCAGTGAGAGAATGAAGCTTCTGCAAGATCTTGTACCTGGTTGCAATAAAGTCACTGGAAAAGCTCTTATGCTTGATGAAATCATAAATTATGTACAGTCATTGCAGCGTCAGGTTGAGTTCCTTTCTATGAAATTGGCCTCAGTGAACACCAGGCTTGATGTGAGCATAGACGATCTCATCTCAAAAGATATATTTCAATCCAATAACTCTTTGGCACACCAAGCACCAATATTCCCCTTAGATTCCTCTGCTACAGCCTTTTATGGTCCCAAGCCAGCAATCCACAATACAATCCCTAATGGAACTGTGTCGCACTCAATGGAATCTTTAGATTCTGCTCTCTGTCAAAGCCTTGGCTTCCAGCTACCCCCTCTGAATGGTTTCATTGAAGGTGCTTCTCAGTATCCAATGACTTTTTGTGAGGAAGACCTCCACGCTATTGTTCAGATGGGGTTTGGGCAAAATGAAAATAGAAAAACACGAACACAATCTCCAAGCTTTAATGGCTCAAACCAGATACCCTATATGAAAGTTGAGCTCTGA 1668 0.4299 MENDFFLNAAAALHFEPSSSSSPLMPTWHSFASSSAMDIPVSSEQPQQEQQEDCFYNPAWEKSSLDHHHHHQALQFDSALSSMVSSPAASNSNLSNDDFVIRELIGKLGNMGNSGEISSYMNGNNSTNTSCYSTPLSSPPKLNIPPPLMNNNNQLMKDKLPMALNSTSVAEFSADPGFAERAAKFSCFGSRSFNGRTSRQVGMNNNADFTQRSSSPLTENGKLSRVSSSPSLKALGSQMENKNSPLNSQEKYTISEQNPNVESGMKPSPPDMNSRKRKASSKGKPKEIASKAAEANEDSSAKRSKPNEGEGHENGQVRAEEESKGGNNNGVEEKQNKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDVSIDDLISKDIFQSNNSLAHQAPIFPLDSSATAFYGPKPAIHNTIPNGTVSHSMESLDSALCQSLGFQLPPLNGFIEGASQYPMTFCEEDLHAIVQMGFGQNENRKTRTQSPSFNGSNQIPYMKVEL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0999 555 MobiDBLite consensus disorder prediction 195 264 - -
Lele43g0999 555 MobiDBLite consensus disorder prediction 271 328 - -
Lele43g0999 555 CDD bHLH_AtBPE_like 349 434 - -
Lele43g0999 555 FunFam Basic helix-loop-helix transcription factor 356 428 - -
Lele43g0999 555 SMART finulus 365 415 IPR011598 GO:0046983
Lele43g0999 555 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 359 409 IPR011598 GO:0046983
Lele43g0999 555 Pfam Helix-loop-helix DNA-binding domain 363 410 IPR011598 GO:0046983
Lele43g0999 555 Coils Coil 406 426 - -
Lele43g0999 555 MobiDBLite consensus disorder prediction 329 343 - -
Lele43g0999 555 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 357 427 IPR036638 GO:0046983
Lele43g0999 555 Gene3D - 356 432 IPR036638 GO:0046983
Lele43g0999 555 MobiDBLite consensus disorder prediction 195 350 - -
Lele43g0999 555 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 243 452 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0999 Lele-ChrLele43 18526760 18529421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0999 1 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.962 2.59e-110 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele43g0999 HLH 4.4e-06 No_clan