Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0990 ATGTATGGTTTAAAACATAAGATAATTGGAGGGTATGCAACCTGGGAAATGAAAATTGCTTTGAAATTGTTAAAACCAAATTATCAAATCCTATACGGGATGTTGAAATGGAACTTGTTTGCAGTTATGCCCAGCTGGCGAAGGCCAAAGGGTATTGATTCCCGTGTAAGGAGAAAATTCAAAGGATGCACCTTGATGCCAAATATTGGTTATGGTTCAGACAAGAAGACCCGTCACTATCTCCCTAATGGATTCAAGAAATTTGTTGTTCACAATGTGAATGAGCTGGAACTCTTGATGATGCACAGCAGGACTTACTGTGCTGAGATAGTGCACAATGTATTAACCTGGAAGCGAAAGGAAATCGTCGAGAGGGCAGCGCAGTTGGATGTTGTTACCAACAGAACAGCCAGGTTGCGTAGCCAAGAGGACGAGTTATTGGCGGTGCCTATCATCAAGTTTTTATTTTTATTTGTTGTCATCTTTTATTGGCTTGAAAACTTTGGAACTTAA 513 0.4016 MYGLKHKIIGGYATWEMKIALKLLKPNYQILYGMLKWNLFAVMPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHSRTYCAEIVHNVLTWKRKEIVERAAQLDVVTNRTARLRSQEDELLAVPIIKFLFLFVVIFYWLENFGT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0990 170 Pfam Ribosomal protein L32 39 131 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele43g0990 170 SUPERFAMILY Ribosomal protein L32e 42 143 IPR036351 -
Lele43g0990 170 CDD Ribosomal_L32_L32e 44 134 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele43g0990 170 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 40 145 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele43g0990 170 SMART Ribosomal_L32e_2 34 134 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0990 Lele-ChrLele43 18452069 18454125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0990 40 145 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.047 9.87e-64 190
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0385 41 3133047 3137882 Lele43g0990 43 18452069 18454125 hybridization