Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0967 ATGGTTCTTGGGATTAACAGGCCTGGCCTAGTTTCTATTACACCGCTTGTGTACGTGGACAAGGGAAATGATGGAGAACAAGGATCTGTAGAAGTGAGTACAAGTATGTTAGATGGAATTGAATTTCAAGAACCATATGTGGGCATGGAATTTAATTCTGAAGAAGATGCCAGAAAATACTATGTTGAATATGCTAGAAGGGTGGGATTTGTAGTACGTATCATGCAACGTCGTTGTTCAGGAATAGATGGCAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGCTTCTCTACAAATAGTAAGGGCACAATTGGACCAGGGAAAAAGCCGAGGCCAAGTGCGCGAGAAGGTTGCAAGGCAACAATTTTAGTGAAGTTGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTGTAAAGGATCACAACCATCCTCTAATTGTTACAGCAAATGGGTTCATCACACCGGGTGATAAAGACAAGAAAATTGAAGAACTAACTAAGGAATTAGAGCGCCAAGATCAGCTATGTGCAGCATATAGAGAAAAACTGATCCGTTTCATGAATAATGTGGAGGAGCAAACACAAGAACTGTCAGAAAAAATTCAAATCATTGTAGAAAATTTAAGGAAAGTTGAATCTGAAGTGCAAAAGAATCCCTTGAATAGAAAGTCTTGGGGTTTAACCTGA 693 0.3968 MVLGINRPGLVSITPLVYVDKGNDGEQGSVEVSTSMLDGIEFQEPYVGMEFNSEEDARKYYVEYARRVGFVVRIMQRRCSGIDGRTLARRLGCNKQGFSTNSKGTIGPGKKPRPSAREGCKATILVKLEKSGKWVVTRFVKDHNHPLIVTANGFITPGDKDKKIEELTKELERQDQLCAAYREKLIRFMNNVEEQTQELSEKIQIIVENLRKVESEVQKNPLNRKSWGLT 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0967 230 Coils Coil 164 216 - -
Lele43g0967 230 Pfam FAR1 DNA-binding domain 59 148 IPR004330 -
Lele43g0967 230 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0967 Lele-ChrLele43 18224159 18226961 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele43g0967 FAR1 1e-28 CL0274