Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0957 ATGGTTCTGAGTAGCCGATTTTTCAGAGAGCATTTTGTTGTTAGTGTCTTGCTGCTGCTTGGTATTAGCATAACCAATGGGACTGAAACTGATATTTTCTGCTTGAAAAGCATACAAGATTCACTTGAAGATCCTTATAATTATTTGAAGTCTTCCTGGAATTTCAGTAATAGAACCGAAGGCTTTATCTGTCGCTTTACTGGGGTTGAGTGTTGGCATGATGATGAGAACAGAGTCTTAAACCTCAAGCTGTCAAATATGGGACTCAGGGGTCAATTTCCTCATGCCATACAAAATTGCTCAAGCTTAACTGCATTGGATCTGTCGATCAACAAACTCTCTGGAACTATTCCAGAAGATATTCCTTCACTTCTTAAATTTGTGGTAACCCTGGACCTCTCGTCAAATAACTTTTCAGGGGAGATCCCTGTGGGCCTTGCAAATTGTTCCTATCTTAATACTCTTAAACTTGATCAAAATCAACTAACTGGTCAAATTCCTCCACAACTTGCCCAGCTCGAACGGCTTAAGGCTTTTACTGTCACAGATAATCTTTTGACAGGGCCAGTTCCATCTTTTGTAGGCAAAGATGGTATTAAAGCAGATAGTTATTCGAATAATTTAGGACTTTGTGGGGGTCCCTTGGGGCCATGCCAGGGTAAGAAGGTTAACACTGCAGTTATAGCTGGTGCTGCCGTTGGTGGAGTAACTGTTGCAGCGTTAGCCCTGGGTATTGTGGCATTTTTCTTTGTCCGCCGAGTCACTGTGAAGAAGGAAGAGGATCCTGAAGGAAATAAATGGGCAAGGAGTCTAAAGGGAACCAAAGGAATAAAGGTTTCTATGTTTGAAAAGTCAGTTTCAAAAATGAAACTGAGTGATCTCATGAAGGCAACTAACAACTTCAGTAAAAGCAATATCATTGGTTCAGGAAGAACAGGGACTATGTACAACGCATTCCTTGATGGTGGCAGCACAATGCTCATGGTTAAAAGGTTGCAAGAATCTCAGTACTCAGAAAAGGAATTTGCCTCTGAGATGGCTACATTGGGGACTGTTAGAAATCGTAACTTGGTTTCCCTTTTAGGTTTTTGTGTGGCCGACCGGGAAAGGCTTTTGGTGTATAAATATATGGAAAATGGAAGCCTTCATGATCAGCTACATCCTGATACCGGTGGGAGCACAATGAAGTGGTCTTTAAGGCTAAAAATTGCAATTGGGGCAGCGAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCTCGTATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGTCTTGCTAGATTGATGAATCCAATTGACACACATTTGAGTACTTTTGTAAATGGCGAGTTTGGAGATCTTGGTTATGTTGCTCCTGAATATACAAGAACTCTGGTGGCTACGCCGAAGGGAGATGTCTTTAGCTTTGGCACCGTTCTTCTCGAGTTGGTGACAGGTGAGAGGCCTACCCATGTGGCTAAAGCTCCTGAAACTTTCAAAGGAAATTTGGTGGAGTGGATTTCAACGCTCTCAAGCAAATCTGAACTCAAGGATGCTATTGATGAATCACTACTTGGGAAGGGTGTTGATGGTGAGATTTTCCAATTTCTCAAGGTTGCATGCAACTGTGTTTCACCAAATCCAAAGGAAAGACCTACTATGTTTGAAGGGTACCAACTTCTTAGAGCAATTGGGAGCAGATACAATTTCACAGCTGATGATGAGATATTGGTACCTACAGATACTGGTGATGCTGCCAATTTCGAGGAACTCATTGTTGCACGAGAAGAAAATAGTTGA 1845 0.4173 MVLSSRFFREHFVVSVLLLLGISITNGTETDIFCLKSIQDSLEDPYNYLKSSWNFSNRTEGFICRFTGVECWHDDENRVLNLKLSNMGLRGQFPHAIQNCSSLTALDLSINKLSGTIPEDIPSLLKFVVTLDLSSNNFSGEIPVGLANCSYLNTLKLDQNQLTGQIPPQLAQLERLKAFTVTDNLLTGPVPSFVGKDGIKADSYSNNLGLCGGPLGPCQGKKVNTAVIAGAAVGGVTVAALALGIVAFFFVRRVTVKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKSNIIGSGRTGTMYNAFLDGGSTMLMVKRLQESQYSEKEFASEMATLGTVRNRNLVSLLGFCVADRERLLVYKYMENGSLHDQLHPDTGGSTMKWSLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVFSFGTVLLELVTGERPTHVAKAPETFKGNLVEWISTLSSKSELKDAIDESLLGKGVDGEIFQFLKVACNCVSPNPKERPTMFEGYQLLRAIGSRYNFTADDEILVPTDTGDAANFEELIVAREENS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0957 614 Pfam Protein tyrosine and serine/threonine kinase 304 569 IPR001245 GO:0004672|GO:0006468
Lele43g0957 614 ProSiteProfiles Protein kinase domain profile. 301 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0957 614 Gene3D Ribonuclease Inhibitor 29 219 IPR032675 -
Lele43g0957 614 Gene3D Phosphorylase Kinase; domain 1 262 376 - -
Lele43g0957 614 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 376 - -
Lele43g0957 614 FunFam Nuclear pore complex protein NUP107 28 192 - -
Lele43g0957 614 SUPERFAMILY L domain-like 29 195 - -
Lele43g0957 614 Gene3D Transferase(Phosphotransferase) domain 1 377 593 - -
Lele43g0957 614 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 194 - -
Lele43g0957 614 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 377 589 - -
Lele43g0957 614 SUPERFAMILY Protein kinase-like (PK-like) 279 574 IPR011009 -
Lele43g0957 614 CDD STKc_IRAK 307 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0957 Lele-ChrLele43 18126808 18129081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0957 16 590 Receptor kinase-like Gene Family AT3G28450 47.079 1.08e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele43g0957 PK_Tyr_Ser-Thr 4.9e-36 CL0016