Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0953 ATGCCAACCTTCTTCTTCTTCTTCGTTTTCTTCCTTTCCTTCTTTTCCTCTAAACCCTTTGTTTCTTCTTCTTCCTCTCGCAGAAGCCTCCATGAACCTTTTCAGCCGTTGGACAACCAGTCTCCTCCTTCTCCTCCTCTCCCTCTTCCTCCTTCGCCTCCTTCTTCTTCAGCTTCACCCCCAGAAACCCCCAAGTTACCATCTTCCACAGATACCCCTGATGCTCCTCCGTTTTTCCCCTCATATCCTGTTTCTCCTCCGCCTCCTCCTCCTCCTGTTGCTACCTTCATTTCTTATCCTGCTAATATTTCCTCTCTTGCCATCCCTCAAACCCCCAGCCAGAAACCGAACTCTTCCTCTAAGCTTGTCGGAGTTACTGTTGCTGCTATTCTCTCTGCCGTTGCCTTTGTTGGGGTTTCTGCCTTTGTCTATTGCCGGTGGCGAAGACGGAGGCGGTTTTCTGATGATGAGAAGGTTATCAGATCCGAGAGTAATCTGAGGTTGTTCTCTGACAATGTTGAAACTGGCAATACTAGTCGCAAGGTTAGGAATACTACTTCTGCTAGCTCTGAGTTTCTTTATCTTGGTACTGTTGTTGATTCGCACGGCATCGGTGACGATCGTGGCCGTTCTGATGCTCGAGGAAATGATAACGGCGTGGGTGGTAATCTGGACCCTCGCAGAATGGACTCGCCGGAGCTTCAACCGCTTCCACCTCTGGCCCGGCAAGCTTTGCTGCAGCAGAATGGAGCGGAGCGTTATGATATGCGTTCGACTACAACAGCAGACGAAGAAGACGAAGAGGAATTCTACTCGCCGAAAGGATCTATGGGTGGTCAGGATAGTTCAAGTGCTACCGGGTCGGGTTCTCGGAGGATCTTCGCGGCTAATGCGGGTGAAAATATCGGCGGACGAAGCAGTGACTCGGGCTCTACTTCATTTTCTTCTACCTCGGGTTCGCCGGACAGGTCACATTCCGCCAGTCTCTCGCCGCCGGTTAGCTTGAGCCCCAAAAGGTCGCAACCGAAATCACAGGAGGCTACGGTGTCACAGATAAACCAGGTTGAATCGTCTGCGTTATCTCCTGTTTACAATAATAATCTGTATGTGCAATCTTCTTCTATGCCAATGCCATCGTCTTCTTCAGCCCCAGAGAAAGCTTTTACTTGTGATGACCAATCTCCTTTGCTATCTCCACTCTCGTTATCACCAAATCGAGCTTTGCAGAAGAATTCTAATTTGTCATCACCGAGATTGTCTAATGCAGTTTCAGAGGGAGTGCAGAGAAATGCAGGTGTTTCTCCAAGATTATCTAATGCTTCATATCAAAGTACGAAGACCGTGTCATCTTCTTCGGCCTTTTCTCTGCCATCATCGCCGGAGAAAGCATGGGAGCGAAGTTTTGATCAGTCTCCAAGAATTTCCAGCTTTTCTGATCGGTATAGGCATTCTCCTCTGTCTCTGTCATCACGGCCATTATCTCCAACCTTGCTTTCATCACCAGAAACAGAATTGTGCAAAATTCCAGTTCAAGATTTCACCCCACAGCGTAAACGATGGGAGATTCCGATTCTCTCAACAACACCCGTTGTTCAGCCTCCTTTGGTTTCAGCTCCGCCTCCTCCTCCACCACCACCGCCACGAGAACATAGTCGGAAACAATGGGAAATTCCATCTCTTTCAACAGCTACTGATCAGCCCATTTCTAGGCCACCTGAGCTAATACCTCCTTCAAGACCTTTTGTGTTGCAAAACCCAACAATGAAGGTTTCATCAGCGGAGTTGCCACCAAGTTCTCGAAATTCAGGGGAAGTCGATGAAGCCCAGAAGCCGAAGTTGAAGCCTCTGCATTGGGATAAAGTGCGATCGAGCTCTGATCGCGAAATGGTGTGGGATCACTTGAGAACAAGTTCTTTTAAATTGAATGAGGATATGATTGAAACTTTGTTTGTGAACGCGCCTAAGAATTCAACCCAACGCCTAGGTCTTTCCCAGCAAAATGAGGAGGACAGAATACTTGATCCTAAGAAGTCGCAAAATATTTCGATTTTACTCAGAGCACTTAATGTAACTATAGAAGAAGTTTGTGAAGCTCTTGTAGAAGGTAGTGCTGATACCCTTGGATCAGAACTACTTGAAAGCTTGTTAAAGATGGCGCCGAGCAAGGAAGAAGAGCGGAAATTGAGGGAACACAAAGATGACTCGCCAACCAAGCTCGGCCATGCTGAGAAATTTCTGAAGGCTATGCTTGATATACCTTTTGCATTTAAAAGGGTGGAAGCAATGCTTTACATTGCTAACTTTGAATCTGAAGTGGAGTATCTCAGGAAATCGTTTGGAATTCTGGAGGCTGCATGTGAAGAGCTGAAAAACAGTAGGATGTTCTTGAAACTTCTAGAGGCTGTGCTTAAAACTGGGAACCGTATGAATGTGGGGACGAACCGAGGTGATGCGCTTGCCTTCAAGCTTGATACCCTTCTCAAGCTTGTTGATGTCAAAGGTGCAGATGGAAAAACCAGCCTTCTGCATTTTGTTGTGCAGGAAATTATAAGAATTGAAGGCGATCGTCTCTCAGGTACCAATCAAACTCCTAACCCTAGCTCCATTGAAGATGCCAAGTGCAGGAAACTTGGACTGCAAGTAGTATACAGTCTGAGTTCAGAGCTAGCAAATGTAAAGAAGGCTGCTGCTATGGATTCCGATGTTCTCATAGGGGAAGTCTCAAAACTTTCTCAAGGACTAAAGAATGTCGCCGGTGTTCTGCAGTTAACCGAAACTTCCAAGTCATCGGATGATGATGATGAAAGCAGCCGGAAATTTTCAGAGTCCATGAACAAATTCATGAGAATGGCTGAAGATGAGATTCAGAAAGTTGATGCTCAGGAGAGAGCTGCTCTGTCTCTTGTGAAGGAACTCACAGAGTACTTCCACGGAGACTTGGCGAAAGAAGAAGCTCATCCATTCAGAATCTTCATGGTGGTAAGAGACTTTCTTACCATTCTCGACCGCGTCTGCAAAGAAGTCGGCATGATCAACGAGCGAACCATGGTTAGTTCCGGGCATAAATTCCCAGTTCCTGTAAACCCTATGCTTCCACAGCCTCTTCCTGGCTTAAATGGGAAGGAGACAATGCAATAA 3138 0.4665 MPTFFFFFVFFLSFFSSKPFVSSSSSRRSLHEPFQPLDNQSPPSPPLPLPPSPPSSSASPPETPKLPSSTDTPDAPPFFPSYPVSPPPPPPPVATFISYPANISSLAIPQTPSQKPNSSSKLVGVTVAAILSAVAFVGVSAFVYCRWRRRRRFSDDEKVIRSESNLRLFSDNVETGNTSRKVRNTTSASSEFLYLGTVVDSHGIGDDRGRSDARGNDNGVGGNLDPRRMDSPELQPLPPLARQALLQQNGAERYDMRSTTTADEEDEEEFYSPKGSMGGQDSSSATGSGSRRIFAANAGENIGGRSSDSGSTSFSSTSGSPDRSHSASLSPPVSLSPKRSQPKSQEATVSQINQVESSALSPVYNNNLYVQSSSMPMPSSSSAPEKAFTCDDQSPLLSPLSLSPNRALQKNSNLSSPRLSNAVSEGVQRNAGVSPRLSNASYQSTKTVSSSSAFSLPSSPEKAWERSFDQSPRISSFSDRYRHSPLSLSSRPLSPTLLSSPETELCKIPVQDFTPQRKRWEIPILSTTPVVQPPLVSAPPPPPPPPPREHSRKQWEIPSLSTATDQPISRPPELIPPSRPFVLQNPTMKVSSAELPPSSRNSGEVDEAQKPKLKPLHWDKVRSSSDREMVWDHLRTSSFKLNEDMIETLFVNAPKNSTQRLGLSQQNEEDRILDPKKSQNISILLRALNVTIEEVCEALVEGSADTLGSELLESLLKMAPSKEEERKLREHKDDSPTKLGHAEKFLKAMLDIPFAFKRVEAMLYIANFESEVEYLRKSFGILEAACEELKNSRMFLKLLEAVLKTGNRMNVGTNRGDALAFKLDTLLKLVDVKGADGKTSLLHFVVQEIIRIEGDRLSGTNQTPNPSSIEDAKCRKLGLQVVYSLSSELANVKKAAAMDSDVLIGEVSKLSQGLKNVAGVLQLTETSKSSDDDDESSRKFSESMNKFMRMAEDEIQKVDAQERAALSLVKELTEYFHGDLAKEEAHPFRIFMVVRDFLTILDRVCKEVGMINERTMVSSGHKFPVPVNPMLPQPLPGLNGKETMQ 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0953 1045 MobiDBLite consensus disorder prediction 469 499 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 276 291 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 533 548 - -
Lele43g0953 1045 SMART it6_source 603 1016 IPR015425 -
Lele43g0953 1045 ProSiteProfiles Formin homology-2 (FH2) domain profile. 603 1027 IPR015425 -
Lele43g0953 1045 SUPERFAMILY Formin homology 2 domain (FH2 domain) 539 1013 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 584 604 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 302 350 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 530 615 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 373 499 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 249 350 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 23 84 - -
Lele43g0953 1045 PANTHER FORMIN-RELATED 418 1035 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele43g0953 1045 MobiDBLite consensus disorder prediction 204 236 - -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 38 84 - -
Lele43g0953 1045 Pfam Formin Homology 2 Domain 607 1001 IPR015425 -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 373 458 - -
Lele43g0953 1045 Gene3D Formin, FH2 domain 604 1010 IPR042201 -
Lele43g0953 1045 MobiDBLite consensus disorder prediction 23 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0953 Lele-ChrLele43 18055459 18059209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0953 555 1041 FH2 protein (formin) Gene Family AT3G25500 70.968 0.0 696