Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0884 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTTCATCATCATCAGCTTCAACGCCCTAATCTTCAATCCAACCAAGATGATGATGATAACCAAGAAGATAGTTCTAACCCTCATGGGCTTAACCCGGCCGGTCCAGGCGTTGTCGTTGTTCGCCGGCCTAGGGGTAGGCCACCCGGATCGAAGAACAAGCCGAAGCCGCCGGTGATAATCACTCGCGAGAGCGCTAACGCGCTCCGAGCTCATATTCTTGAGGTTAGCAGCGGCTCCGATGTGTTTGAGTGTGTGGCGACTTATGCAAGGAGGAGACAGCGAGGGATCTGTGTTTTGAGTGGGAGCGGCACCGTCACCAACGTGACAATCCGGCAGCCATCGGCAGCCGGGGCAATCGCAACGCTGCAGGGGCGGTTCGAGATACTGTCGCTATCCGGATCTTTCTTGCCGCCTCCGGCTCCGCCAGGAGCGACAAGCCTGACCGTATTTCTCGCCGGAGGGCAAGGTCAAGTGGTAGGAGGAAATGTTGTTGGGGCGTTAGTGGCGGCTGGGCCAATTATTGTGATTGCTTCTTCATTTACCAACGTAGCATATGAGAGATTGCCATTAGACAACGAGGAGGAACCCTCACCGGTCCAAAACGGGGGCGATGGCGACGATGGTAGCCGAGACATGAACGGATTTCCGAACTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAGTTGCCCCTTAACGGTAGTAATTGGGTTGAAAATTCTGGTGGAGGAAGATCTCAGCCGTATTAA 804 0.5361 MAGLDLGSSQSHHFLHHHQLQRPNLQSNQDDDDNQEDSSNPHGLNPAGPGVVVVRRPRGRPPGSKNKPKPPVIITRESANALRAHILEVSSGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSAAGAIATLQGRFEILSLSGSFLPPPAPPGATSLTVFLAGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPSPVQNGGDGDDGSRDMNGFPNSSSGLPFLNLPVNMSQLPLNGSNWVENSGGGRSQPY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0884 267 MobiDBLite consensus disorder prediction 203 240 - -
Lele43g0884 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 218 IPR014476 GO:0003680
Lele43g0884 267 ProSiteProfiles PPC domain profile profile. 79 215 IPR005175 -
Lele43g0884 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 209 - -
Lele43g0884 267 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Lele43g0884 267 Gene3D - 82 209 - -
Lele43g0884 267 CDD DUF296 83 166 IPR005175 -
Lele43g0884 267 PIRSF ESCAROLA 2 263 IPR014476 GO:0003680
Lele43g0884 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Lele43g0884 267 MobiDBLite consensus disorder prediction 24 73 - -
Lele43g0884 267 MobiDBLite consensus disorder prediction 226 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0884 Lele-ChrLele43 16297977 16298780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0884 53 267 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 69.302 1.10e-88 263