Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0881 ATGCTTTGGGAGGACTTATCCAACATGGTTTTAAGTGCTTCAAGTCTAAAATTGGACTCACCATGCATGTTGGAGCATGTAATGCTACCAGTGGGAATTGGGTTTTTATTAATATGGTTGATCCAAATGATAATAAAAGGTGGGGAACTTATAAGGAAGAAGAAGAACAAGGTCACAGGACAGAACACAGAGATTCTTCATCCCACTGTTCTGAAGTATGGTTTAGCTTACAAAACCAGTATATTTTGCTGCACTTTACTGCTTGCAATTCATATCTTTTTGCTTCTGATGATGGTAAAAGTTCAGACTCAGTGCAATTCAAAACTTATGGCTTTTACATCAGAAACAGTTCTGGTTTTAGCATGGGCAATTGCATTGATATCAGTGTGGAAGATGCCAAAAGTCAATGTTAAGTTCCCTTGGATGATAAGATCATGGTGGATTTGCAGCTTCTTTTTGTGCATTACCAACTTAGGGTTTCATAGCCATTTCAGTATCAGCAAAAGGATAGAGATTGGATTCATGGAATATGCAGATTTGCTTGGCCTGCTTGCTTCAACGGTTCTAGTGGGAATTTCAATGAGGGGAAGAACTGGGATCGTGTTGATTGCTACAGATGGAATCTCTGAGCCACTTTTGAGCGAGAAAACCGGAAAAGATAAGGAATCTTCCAAAAGGGAATCTTTATATGGGAAATCTACTTTCATTGAACTCATTACCTTCTCATGGCTCAATCCTTTGTTTGCCATAGGGTATAAGAAAGCTCTTGAACAAAGTGATATTCCTGATGTTGCCATTGAGGATTCTGCAGAATTTCTATCTTCATGCTTTGATGAAAGCCTAAGAAAAGTCAAGGAGGCTGATGGGACCATAAATCCATCTTTTTACAAGGCAATCTATCTATTTGCAAGGAAGAAGACTCTGATCAATGCATGTTTTGCAGTAAGAATGACAGATTTCATTGCCGTTGATGCTCATACCGGAAGCCACCTGTTCAAGGAGTGCCTTATGGGGACTCTTAGAGAAAAAACTATACTTTATGTTACCCACCAAGTGGAGTTTCTTCCTGCAGCAGACCTTATTCTGGTTATGCAAAATGGAAGGATTGCACAAGCTGGAACCTTTGAACAACTTCTAAAGCAAAACATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTGGAGTCAATTCTCATGGTTGAGAATTCGAGCAGAACAACTCCAAACCTGGAACCCGAAGGCGAATCAAATGTCAATTCTCAGTCAAAATCAGAACTTTCTCCCACTCAACATAACAACAAAGAGCAAGGAAGTCCCCTGGAGATCAAAGAAAAAGAAGTGGCAAAAGCTGGACTTTGGACTGCACAGAAACTATTTATCACTATGTTGCATAGCGTACTTCGAGCACCGATGTCATTTTTCGATTCAACTCCAAATGGCAGAATTTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAACCAAATTAGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACCATTGCAGTACTGTCACAGGTGGCATGGCAAGTATTTGGCATCTTCATTCCAGTAACCGCAGTCTGCATATGGTATCAAAGATATTATACACCAACAGCAAGAGAACTAGCTCGCTTGTCACAAATACAAATGACTCCAATTCTGCATCATTTTGCAGAATCATTAGCAGGAGCAGCATCTATTCGAGCATTCGATCAAGAAGGCCGTTTCGTGTATTCAAATCTTGAGCTTGTTGACAACTACTCAAAACCATGGTTCCATAATGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTTTTTGCCTTCTCTCTGGTTTTGCTTGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAATTTGAATGTATTGCAAGCATCAGTGATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATCTCAAAAGTGAAGCAGCTCTTGTTATTGAAGATTCTAGGCCACCAAACAACTGGCCAGAAGTTGGAACAATATGTTTCAAAAACTTACAGATACGTTATGCTGAACATCTACCATCTGTTCTGAAAAACATCAATTGCACATTTCCGGGAAGGAAGAAAATCGGCGTGGTGGGACGAACCGGGAGTGGAAAATCAACCTTAATACAGGCGATTTTCAGGGTTGTTGAACCTTGGGAAGGAAGGATTATAATTGACGATTTGGATATATGCAAGATTGGTCTGCATGACTTAAGGTTGAGACTTAGCATCATTCCACAGGATCCCACAATGTTTGAAGGAACAGTTAGAGGAAACTTGGACCCACTTGAGCAATACTCTGATAAGGAGGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAAGCCTCAGTGGTTGAGAATGGAGAAAACTGGAGTGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAACATACTTGTGTTAGACGAAGCAACAGCATCAGTTGATTCTGCAACTGATGGAGTTCTACAAAAGATCATCAGCCAAGAATTCAAAGATAGAACTGTTGTCACTATAGCCCATCGTATCCATACCGTTATCAATAGCGATTTGGTTTTGGTTTTGAGTGATGGGAAAATCGCGGAGTTCGATGCGCCGTCAAAGTTACTCGAAAGAGAAGATTCCTTCTTTTCTAAACTCATAAGGGAGTACTCAAGAAGATCACAGAGTTTCAATAGCTTGTCCACTCAAAATGGCCAATGA 2877 0.4029 MLWEDLSNMVLSASSLKLDSPCMLEHVMLPVGIGFLLIWLIQMIIKGGELIRKKKNKVTGQNTEILHPTVLKYGLAYKTSIFCCTLLLAIHIFLLLMMVKVQTQCNSKLMAFTSETVLVLAWAIALISVWKMPKVNVKFPWMIRSWWICSFFLCITNLGFHSHFSISKRIEIGFMEYADLLGLLASTVLVGISMRGRTGIVLIATDGISEPLLSEKTGKDKESSKRESLYGKSTFIELITFSWLNPLFAIGYKKALEQSDIPDVAIEDSAEFLSSCFDESLRKVKEADGTINPSFYKAIYLFARKKTLINACFAVRMTDFIAVDAHTGSHLFKECLMGTLREKTILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNIGFEVLVGAHSQALESILMVENSSRTTPNLEPEGESNVNSQSKSELSPTQHNNKEQGSPLEIKEKEVAKAGLWTAQKLFITMLHSVLRAPMSFFDSTPNGRILNRASTDQSVLDLEMATKLGWCAFSIIQILGTIAVLSQVAWQVFGIFIPVTAVCIWYQRYYTPTARELARLSQIQMTPILHHFAESLAGAASIRAFDQEGRFVYSNLELVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERIIQYSNLKSEAALVIEDSRPPNNWPEVGTICFKNLQIRYAEHLPSVLKNINCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPWEGRIIIDDLDICKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKEVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSNILVLDEATASVDSATDGVLQKIISQEFKDRTVVTIAHRIHTVINSDLVLVLSDGKIAEFDAPSKLLEREDSFFSKLIREYSRRSQSFNSLSTQNGQ 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0881 958 MobiDBLite consensus disorder prediction 406 442 - -
Lele43g0881 958 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 321 436 - -
Lele43g0881 958 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 708 940 IPR003439 GO:0005524
Lele43g0881 958 FunFam ABC transporter C family member 5 443 687 - -
Lele43g0881 958 Gene3D - 688 942 IPR027417 -
Lele43g0881 958 Pfam ABC transporter transmembrane region 451 633 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0881 958 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 450 669 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele43g0881 958 Pfam ABC transporter 723 871 IPR003439 GO:0005524
Lele43g0881 958 CDD ABCC_MRP_domain2 704 924 - -
Lele43g0881 958 FunFam ABC transporter C family member 3 689 941 - -
Lele43g0881 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 936 IPR027417 -
Lele43g0881 958 SMART AAA_5 732 917 IPR003593 -
Lele43g0881 958 SUPERFAMILY ABC transporter transmembrane region 450 686 IPR036640 GO:0005524|GO:0016020
Lele43g0881 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 384 IPR027417 -
Lele43g0881 958 MobiDBLite consensus disorder prediction 406 438 - -
Lele43g0881 958 Gene3D - 320 406 IPR027417 -
Lele43g0881 958 CDD ABC_6TM_ABCC_D2 449 681 IPR044726 GO:0140359
Lele43g0881 958 Gene3D ABC transporter type 1, transmembrane domain 449 687 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0881 Lele-ChrLele43 16163111 16173472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0881 723 940 Calmodulin-binding Proteins AT2G36910 31.780 1.35e-32 135