Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0863 ATGTTCGATAACGTGAAGTCCCACAAAAAGCTTAAAGTGTATAAAAGGAGGCTAAAATCTAAGGAGGTGAATTCAGGTGATGCCAATAAAAATGAAATTCAACCTCAACTTGCCATTGTTCTTGTTCCTCAAGAATGTGATCCTATTAACATTGAGCATTTTGATTCCAACGCCAATGTCTCTAAATATTACACGCAAAGAAATGTTGAATTTCCTACCAAATATTATCACATGATGGGTAGTCCTGAACCAAAGAGGAATGATATGAATTTGTTAAATTTTGAATCCTATAATCATCTTTCGAAGATTCCAGATCTTGAAGATCATGTTGAAGATATTGATGATATTGCTGCCCGATGTCATTATAATCATGCCACCCCTAAATTGAAGAGGAAGAATTCATTTGGTTTGGATGATATTGATTTTGAAGGAAGGTGGGAAGGGATAAATTCCAATAAAGCGGTTCGAGGGAGAAAATTTCATTCAATGATTTCAAGAGGCAGACAATCTAATGAAGAAAGAAATTATAAAGCTAGGTCCTTAAGTGCAGGACAAAAGAGGGAAACAAAGGCACCCCAAATAGAGGATGAGGAAGAAACCGATGAACCAGATATATTGCGAAGAGAAATGGAAGTTTCATTGGCGTCAAGTTATTTTGAAGAAGACACAGAGCTATCTTATCAGGGTGCTGAGTTGGAACGTTCAATGTGGCACCATGAGGAGAAGCAATGCGGTGGAGAAGGTTCAGAACCAGAGCAAAAGGCTGATGAAAATGATGGTTTCCATCTTTTGTTGACTGATGCTTTGCCTGATCAACCAATAACTGGAGAAAATGATAATGTATGGGCATTAATTCCTGAACTTAGGTGCAAATTGCACATCCACCAACAAAAAGCTTTTGAGTTTCTTTGGAAAAATATTGTTGGGTCTATGGACCCCACACTTATGGAAGCAGCATCCAAAAAGAGAAGTGGTTGTGTGATATCTCATTCTCCTGGAGCTGGAAAAACATTCCTTATTATTGCATTTCTTGTTAGCTACTTGAAGTTATTCCCAGGGAAGCAACCATTGGTTCTTGCTCCGAAGACAACACTTTATACATGGTATAAAGAATTTACTAAATGGAAAATTCCTATTCCAGTGTATCTAATTCATGGCCGTAGAACCTATCGAGCATTCAAGCAGAATACAGTGGTTTTTCATGGTGGTCCAAAGCCTACTTATGATGTCAAGCATATTACAAAAGTGGCACGCACACCTAAGTGTTCTAGTCATAGGGAAAGTCCTGATATTCTTATACTGGATGAAGGGCACAATCCTATAAGCACAAAATCAAGGTTGAGGAAAGGTTTGATGAAAGTGCAGACAGAATTGAGAATATTACTTTCAGGTACATTGTTTCAGAACAATTTCTGTGAATACTTCAACTCTCTTTGCTTGGCCAGACCAAACTTTGCTTTTGAAGTGTTGAAAAAACTGGACCCTAAATATAAGAGGAAAATGAAAGGAACAGGAAAGCAGGGTCTGAACATGTTGAGAAAGATGACCAGTGGTTTTATAGATGTTTATGAAAATGGGAATTCAGAGGATCTTCCTGGTTTACAAATCTATCCATTATTAATGAATACTACTGATATACAGAATGAGATTTTGAATAAACTCCAGAAGAAAATGTCTGGGTGCAATGGATATCCTTTGGAGTTAGAACTTTTGATAACCCTTGGATGA 1728 0.3733 MFDNVKSHKKLKVYKRRLKSKEVNSGDANKNEIQPQLAIVLVPQECDPINIEHFDSNANVSKYYTQRNVEFPTKYYHMMGSPEPKRNDMNLLNFESYNHLSKIPDLEDHVEDIDDIAARCHYNHATPKLKRKNSFGLDDIDFEGRWEGINSNKAVRGRKFHSMISRGRQSNEERNYKARSLSAGQKRETKAPQIEDEEETDEPDILRREMEVSLASSYFEEDTELSYQGAELERSMWHHEEKQCGGEGSEPEQKADENDGFHLLLTDALPDQPITGENDNVWALIPELRCKLHIHQQKAFEFLWKNIVGSMDPTLMEAASKKRSGCVISHSPGAGKTFLIIAFLVSYLKLFPGKQPLVLAPKTTLYTWYKEFTKWKIPIPVYLIHGRRTYRAFKQNTVVFHGGPKPTYDVKHITKVARTPKCSSHRESPDILILDEGHNPISTKSRLRKGLMKVQTELRILLSGTLFQNNFCEYFNSLCLARPNFAFEVLKKLDPKYKRKMKGTGKQGLNMLRKMTSGFIDVYENGNSEDLPGLQIYPLLMNTTDIQNEILNKLQKKMSGCNGYPLELELLITLG 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0863 575 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 7 574 IPR044567 GO:0080188
Lele43g0863 575 SMART ultradead3 288 500 IPR014001 -
Lele43g0863 575 Gene3D - 272 521 IPR038718 -
Lele43g0863 575 MobiDBLite consensus disorder prediction 160 204 - -
Lele43g0863 575 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 486 IPR027417 -
Lele43g0863 575 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 317 484 IPR014001 -
Lele43g0863 575 MobiDBLite consensus disorder prediction 165 194 - -
Lele43g0863 575 Pfam SNF2-related domain 291 520 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0863 Lele-ChrLele43 14440318 14442948 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lele43g0863 SNF2_N 1.2e-15 CL0023