Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0854 ATGGAAGGAGAAAGAGGCGTTCCGAATTATGAACTTCAGGTCTCGTTCACAAACCCTCATCCTCAAGCCATCCACGAAATGAGTTTTGTTCAATTAGAAGAGAACCAAGTTCTCAGCTTCTTGGCTCCTTCTGCTCAGTCTCAATCTTCTTCCTGTGGCGGCAGCAGCGCGGCGGCCCCTTCCACAGTACCAGCCATCAATGGAGGAGCCGCGGCCGCCAGCACAGTTGCAACTTCGGTCGGGTTTAGCCATAATGACCTTGTTACTACCAGAACTCCATGGAACAACGACCAGGTGGGAACTCTGGATCCCAAGGCTGTCAATGATGAAAACTGCACTGGAAATGCTAGTGACGGCAACAATACATGGTGGAAGAATACAGCATCAGAGAAATGCAAAGTGAAGGTGAGGAGGAAGCTGAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGCTACAAATGGAGGAAGTATGGCCAGAAAGTTGTCAAAAACAGCCTTCATCCAAGAAGCTACTACCGTTGCACCCATAGCAATTGCAGAGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGGATGGTGATAACCACTTATGAAGGAAGGCACAATCACTCTCCTTGCGACGACTCAAATTCATCTAAACATGAATGCTTCACCTCTTTCTAA 693 0.4733 MEGERGVPNYELQVSFTNPHPQAIHEMSFVQLEENQVLSFLAPSAQSQSSSCGGSSAAAPSTVPAINGGAAAASTVATSVGFSHNDLVTTRTPWNNDQVGTLDPKAVNDENCTGNASDGNNTWWKNTASEKCKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHSNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSKHECFTSF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0854 230 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0854 230 SUPERFAMILY WRKY DNA-binding domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele43g0854 230 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0854 230 FunFam WRKY transcription factor 57 142 216 - -
Lele43g0854 230 ProSiteProfiles WRKY domain profile. 151 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele43g0854 230 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 217 IPR044810 GO:0003700
Lele43g0854 230 Gene3D WRKY domain 143 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0854 Lele-ChrLele43 13731279 13737961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0854 3 230 WRKY Transcription Factor Family AT2G44745 54.008 5.16e-68 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele43g0854 WRKY 1.5e-24 CL0274