Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0815 ATGAGTCAGTGTGTTCCTAGCTGGGATTTTTACGAAAATCCTACAGTTCCCAAAGTTTCTCTCCGTTCAAATTCCAACAATTTCACAGCTCCTGATGTTCCCATGTTAGACCTCGAAGTTGCAGAGCTTACATGGGAAAATGGTCAGCTTTCCATGCATGGTTTGGGTCTGCCAAGAGTACCGGAGAAACCCATCTCCGCCGCCGGCGTAACAGCCGCCAAGTCAACGGCTCCTTCTTCTAAGTACGCCTGGGAGAAGCCTCGTGTGAGTGGTACATTGGAGTCCATAGTCAACCAAGCCACTCGCTTTCCCCACCGTAGCAAATCCGTCTTCGACGTCGGCGCCGCCTCTGAGGGAGGTGACTTAGTGCCGTGGTTTGATCCCCAGAGAGCGGAGGCGGTAATGGCTACCGCTTCTGCGGCGGCGAATACGATGACCATGGACGGCATGGTGCCTTGTTCAAATCGAAAGGACGAGCAGCAGACCACGCAGGTTATGGACTCAGTACCCTGTGGTGGTGGTGGCGGCGGCGGCGCGTGTAGCACTTGCGGAGTGGGCTGCTCCGCATGTGTGGGGTCCTGTAGTGGGTCCGCCAACAAAGAGGATGAGGCACTCTTGGCGGCGAAACGCGCGAGGGTGGCGCGTGTGCCGGTGGATCATGAGTGGAGTAGCAGAGATCCAAGTGTTAGTGGATGTGCTACGTTTGGAAGAGAAAGCCAGCACGTGACGTTGGACACGTGCGATAAGGGATTGGGGATGGGTTTCATTTCCACATCTATGGGTTCGACAGAAAACACCAGCTTCGCTACGCGGTGCACCAAAACAACCACCGCCGACCAACCCGATTCTGTTTGCCATAGCCTACCACAGAAAGAGTCAGGTGATGAGGAGGACGAAACGAAAGGAATAGGAAAATCAGTATCCACTAAAAGTAAGGCTGCAGCTATACACAACCAATCTGAAAGGAAAAGGAGGGATAAGATAAACCAGAGGATGAAGACATTGCAAAAGCTGGTCCCAAATTCCAGCAAGACTGATAAAGCTTCAATGCTGGATGAGGTGATAGAGTATGTAAAGCAATTGCAAGCACAAGTGAACATGATGGGTAAAATGAATATGTCAGCCATGATGCTACCAATGGCCATGCAGCAACAGCTTCAAATGTCTATGATGCCTCCCATGAACATGGGGATGGGTTTGGGAATGGGCATTGACATGAATGCCATCAGTCGGCATGCTAATAGCATTGCCGGCATCCCACCGGTTTTCCATCCTCCAGCACTCTTGCCTTTGGTTTCATGGGATGCCTTACTCGGCACCACCGATCGACTACAAGGAGTTCCATCAACAACGGTGATGCTTGACCCATTATCCACATTTTTTACGGGGCAATCCCAGCCTATGACCATGGATGCATACAATAGGATGGTTGCCATGTATCAGCAGTTATACCAACCTCTAGCTTCTACTTCAAAGAGCTGA 1482 0.5121 MSQCVPSWDFYENPTVPKVSLRSNSNNFTAPDVPMLDLEVAELTWENGQLSMHGLGLPRVPEKPISAAGVTAAKSTAPSSKYAWEKPRVSGTLESIVNQATRFPHRSKSVFDVGAASEGGDLVPWFDPQRAEAVMATASAAANTMTMDGMVPCSNRKDEQQTTQVMDSVPCGGGGGGGACSTCGVGCSACVGSCSGSANKEDEALLAAKRARVARVPVDHEWSSRDPSVSGCATFGRESQHVTLDTCDKGLGMGFISTSMGSTENTSFATRCTKTTTADQPDSVCHSLPQKESGDEEDETKGIGKSVSTKSKAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYVKQLQAQVNMMGKMNMSAMMLPMAMQQQLQMSMMPPMNMGMGLGMGIDMNAISRHANSIAGIPPVFHPPALLPLVSWDALLGTTDRLQGVPSTTVMLDPLSTFFTGQSQPMTMDAYNRMVAMYQQLYQPLASTSKS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0815 493 MobiDBLite consensus disorder prediction 289 305 - -
Lele43g0815 493 Gene3D - 308 373 IPR036638 GO:0046983
Lele43g0815 493 FunFam transcription factor UNE10 isoform X1 307 372 - -
Lele43g0815 493 Coils Coil 318 338 - -
Lele43g0815 493 MobiDBLite consensus disorder prediction 316 330 - -
Lele43g0815 493 CDD bHLH_AtPIF_like 312 373 - -
Lele43g0815 493 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 312 361 IPR011598 GO:0046983
Lele43g0815 493 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 491 IPR031066 -
Lele43g0815 493 SMART finulus 318 367 IPR011598 GO:0046983
Lele43g0815 493 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 315 384 IPR036638 GO:0046983
Lele43g0815 493 MobiDBLite consensus disorder prediction 277 330 - -
Lele43g0815 493 Pfam Helix-loop-helix DNA-binding domain 317 362 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0815 Lele-ChrLele43 8971673 8981674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0815 1 477 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 45.194 1.13e-86 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele43g0815 HLH 9.5e-14 No_clan