Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0814 ATGAGTCTGCGTGTTCCTAGCTGGGATTTGGACGAAAATCCTACAGTTCCCAAAGTTTCTCTCCGTTCAAATTCCAACAATTCCACATCTCCTGATGTTCCCATTTTAGACTACGAAGTTGCAGAGCTTACATGGGAAAATGGGCAGCTCTCCATGCATGGTTTGGGTCTGCCAAGAGTACCGGAGAAACCCATCTCCACCGCCGGGGCAACCGCCGCCAAGTCAACGGCTCCTTCTTCTAAGTACGCATGGGAGAAGCCTCGTGCGAGTGGTACGTTGGAGTCCATAGTCAACCAATCCAGCCGCTTTCCCCACCGCAGCAAATTCGTCTTCGACGTCAGCAACGCCGCTGAGGGAGATGACTTAGTGCCGTGGTTTGATCCCCAAAGAGCGGGGTCGGTAATGGCTACCGCTTCTGCGGCGGCGGCGGCGGCGAATACGATGACCATGGACGCCATGGTGCCTTGTTCAAATCGAAAGGACGAGCAGCAGACCCCGCAGGTTATGGACTCAGTGCCCTGTGGTGGTGGTGGCGGCGGCGCGCGTGGTGATGAGGAGGACGAAAAGAAAGGAATAGGAAACTCAGTGTCCACTAAAAGTAAGGCTTCAGCTATACACAACCAATCTGAAAGGAAAAGAAGGGATAAGATAAACCAGAGGATGAAGACATTGCAAAAGCTGGTCCCAAATTCCAGCAAGGTATATTCTCAATACATAGTTGCAATTGCTGTCTCTACTAATGATAGTGTTGTATCAGTAGTGCCAGCCGAAATGGATGTCCACCTCATTAGAAACCATGGAAAAGATACATGGATTTGGATTGAGGAGACAGAAGTGGGGTCTGGAAAATGTGGTTCAAAACCTGCTACTTCTAATTCATCAGATAATGGATATGGGAAAATAATAATAAGGCAGTGTTTGGCAGCCACATGTTTATTGTCCACAAAACTCTCTGTAACGCATGGTGGCACTTTGACATTTGGTTGA 987 0.4894 MSLRVPSWDLDENPTVPKVSLRSNSNNSTSPDVPILDYEVAELTWENGQLSMHGLGLPRVPEKPISTAGATAAKSTAPSSKYAWEKPRASGTLESIVNQSSRFPHRSKFVFDVSNAAEGDDLVPWFDPQRAGSVMATASAAAAAANTMTMDAMVPCSNRKDEQQTPQVMDSVPCGGGGGGARGDEEDEKKGIGNSVSTKSKASAIHNQSERKRRDKINQRMKTLQKLVPNSSKVYSQYIVAIAVSTNDSVVSVVPAEMDVHLIRNHGKDTWIWIEETEVGSGKCGSKPATSNSSDNGYGKIIIRQCLAATCLLSTKLSVTHGGTLTFG 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0814 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 198 236 IPR036638 GO:0046983
Lele43g0814 328 MobiDBLite consensus disorder prediction 1 30 - -
Lele43g0814 328 MobiDBLite consensus disorder prediction 161 217 - -
Lele43g0814 328 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 40 233 IPR031066 -
Lele43g0814 328 Coils Coil 207 227 - -
Lele43g0814 328 Gene3D - 197 244 IPR036638 GO:0046983
Lele43g0814 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 201 250 IPR011598 GO:0046983
Lele43g0814 328 Pfam Helix-loop-helix DNA-binding domain 206 230 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0814 Lele-ChrLele43 8946479 8951095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0814 1 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 40.893 4.84e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele43g0814 HLH 1.6e-07 No_clan