Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0808 ATGTTGGATTATGAATGGGGAAATCCGTCCACTATAATGATCACCGGAAACGACGAAGCTGCCGCCGCCGCCGCAGAATCTGAACAGACACACCGGCAAATTTTCGACCACTACAATTCTCACCCGTTCTTACCCGACCACCTTATTTCCCAAGCTCCACCGGGACCCACACCGACCACCACCGCCACAACCTCTGATTTCTCTCTTTTACACGACCATCAACAATTTCACTTGCAACCCCATCACCATATTCACCAGCAACACCACCATCAACAACAACAACATTCTCTCTTTGACACACTCGCCTTCTCCGTCGCGTCATCGTCTCATTTCCCTCCGGCACAACCACAACCACCGGCACGGTCACATCATTCCATGTTCTCCCTTGACCCGCTCCCTACGGTCCACGCCGGCAACTGCGGACCTGGTGGTGGGCTTCTGTTGTTGCCCAAGTCTGAAGATGTGGGTCGGTCCATGGACTTCTCGGTGTCTCGAATTGGTCTCAACCTCGGCGGCCGAACGTACTTCTCCAGCTCCGAGGACGACTTCGTGAGCCAGCTCTACCGCCGGCCCAGGCCGTTGGAACCGGGTTCAACTATGTCGTTCAACAACAACTCGCCGAGATGCCAAGCCGAAGGATGCAATGCCGATCTCTCTCACGCGAAGCACTATCACCGCCGACACAAGGTTTGCGAGTTTCACTCCAAGGCTGCCACCGTCATCGCCTCCGGGTTGACTCAGCGATTCTGCCAGCAATGTAGCAGGTTTCATCTTCTTTCGGAGTTTGATAACGGAAAACGAAGCTGCAGGAAAAGATTGGCAGATCATAATCGTCGCAGAAGAAAAACTCAACAACAACCACCACCACTACCACCTCAAGAAAGCCAGAAATCTCAACTCGAAAAGCCTCGAAATTCTACTTTGGACACTATTGTAGCAAAAGGGTCCCCGCCAGATTCCGGAATCCATTCATCCTCATCGGTGACGTTGGCGGTGTCGCCGCCAGATTATTTCCAACAAAAGCCATATCATAATGCAACATCAAGGACATTGTTTTTCTCAAGTGGGTAG 1071 0.521 MLDYEWGNPSTIMITGNDEAAAAAAESEQTHRQIFDHYNSHPFLPDHLISQAPPGPTPTTTATTSDFSLLHDHQQFHLQPHHHIHQQHHHQQQQHSLFDTLAFSVASSSHFPPAQPQPPARSHHSMFSLDPLPTVHAGNCGPGGGLLLLPKSEDVGRSMDFSVSRIGLNLGGRTYFSSSEDDFVSQLYRRPRPLEPGSTMSFNNNSPRCQAEGCNADLSHAKHYHRRHKVCEFHSKAATVIASGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQQPPPLPPQESQKSQLEKPRNSTLDTIVAKGSPPDSGIHSSSSVTLAVSPPDYFQQKPYHNATSRTLFFSSG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0808 356 FunFam Squamosa promoter-binding-like protein 14 200 270 - -
Lele43g0808 356 Gene3D - 204 270 IPR036893 GO:0003677|GO:0005634
Lele43g0808 356 SUPERFAMILY SBT domain 207 286 IPR036893 GO:0003677|GO:0005634
Lele43g0808 356 MobiDBLite consensus disorder prediction 275 341 - -
Lele43g0808 356 Pfam SBP domain 209 282 IPR004333 GO:0003677
Lele43g0808 356 ProSiteProfiles Zinc finger SBP-type profile. 206 283 IPR004333 GO:0003677
Lele43g0808 356 MobiDBLite consensus disorder prediction 295 341 - -
Lele43g0808 356 Coils Coil 266 286 - -
Lele43g0808 356 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 189 309 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0808 Lele-ChrLele43 8600764 8602494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0808 1 256 SBP-box Gene Family AT1G02065 45.489 2.87e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele43g0808 SBP 9.8e-31 No_clan