Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0799 ATGGAAAGTGATGCCCAAGGCACCTCTGGTTCATCCCCTTCGTCTCCATCATCTTCTTCTTCTTCATCGTCATCATCATCAAATTCAGATTCTGGTACCAAGAGAGATTCAACAAGTGTTTCAGATCAGCATAATAGCGATTATTCCTGCAACAACAACAAGAAGAAGAAGCAGGTAAGTGACGAAAAGGATAATCATAATAACAATAAGGATCCATCGTACAGAGGTGTGAGGATGAGGAACTGGGGAAAATGGGTTTCAGAGATTCGTGAGCCAAGGAAGAAATCCAGAATATGGCTTGGAACTTACCCTACTGCAGAAATGGCTGCTCGAGCTCACGATGTCGCGGCTTTAGCCATCAAAGGTCATTCGGCTTACCTCAATTTCCCTCACTTGGCTCCGGAGCTTCCCCTGCCGGCCACCACTGCTCCGAAGGACATCCAAGCGGCCGCCGCGAAGGCTGCGGCTACTGTCTTTGAGGTGGCAAGTAATAATAAGCATTGTCAAAACGAGGAAGCCGAGGCTGGGCCGGGCCAAGCCGAGCCGGCCTCATCATCTTCAACTCAAGATCGGTCTTCTTGTTCTGAAATATCGTCCTCAAAGGAAGAAGACGCGGCTTTGTTTGACCTACCAGATCTTTTCACTGATGGCAACAATGGTCTTTGTTCTTATTCTTCTGTTTCTTCTTCATCTTCTTCTTCTTGGACTTTTTGTGCCGCTGATAGTGGTTTCAGGCTGGAGGAGCCATTTCTTTGGGAAAATTACTAG 768 0.4714 MESDAQGTSGSSPSSPSSSSSSSSSSSNSDSGTKRDSTSVSDQHNSDYSCNNNKKKKQVSDEKDNHNNNKDPSYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPHLAPELPLPATTAPKDIQAAAAKAAATVFEVASNNKHCQNEEAEAGPGQAEPASSSSTQDRSSCSEISSSKEEDAALFDLPDLFTDGNNGLCSYSSVSSSSSSSWTFCAADSGFRLEEPFLWENY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0799 255 Gene3D AP2/ERF domain 73 131 IPR036955 GO:0003700|GO:0006355
Lele43g0799 255 SMART rav1_2 73 136 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Lele43g0799 255 Pfam AP2 domain 72 123 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 MobiDBLite consensus disorder prediction 169 203 - -
Lele43g0799 255 MobiDBLite consensus disorder prediction 49 73 - -
Lele43g0799 255 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 54 217 - -
Lele43g0799 255 ProSiteProfiles AP2/ERF domain profile. 73 130 IPR001471 GO:0003700|GO:0006355
Lele43g0799 255 MobiDBLite consensus disorder prediction 1 76 - -
Lele43g0799 255 FunFam Ethylene-responsive transcription factor 2 73 131 - -
Lele43g0799 255 MobiDBLite consensus disorder prediction 1 48 - -
Lele43g0799 255 MobiDBLite consensus disorder prediction 180 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0799 Lele-ChrLele43 8337584 8338351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0799 63 251 AP2-EREBP Transcription Factor Family AT2G44940 53.456 3.64e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele43g0799 AP2 1.4e-14 CL0081